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References
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[1]
Crystal structure of a yeast TBP/TATA-box complex - NatureOct 7, 1993 · The 2.5 Å crystal structure of a TATA-box complex with yeast TBP shows that the eight base pairs of the TATA box bind to the concave surface of TBP.
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[2]
Crystal structure of yeast TATA-binding protein and model ... - PNASCrystal structure of yeast TATA-binding protein and model for interaction with DNA. ... Submission history. Published online: September 1, 1993. Published in ...
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[3]
TATA Binding Protein - an overview | ScienceDirect TopicsTATA binding protein is defined as a germ cell-specific transcription factor that binds to the TATA box of promoters, interacts with transcription factors IIA ...
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[4]
Crystal structure of TFIID TATA-box binding protein - NatureNov 5, 1992 · This highly symmetric α/β structure contains a new DMA-binding fold, resembling a molecular 'saddle' that sits astride the DMA.
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[5]
The TATA-binding protein as a regulator of cellular transformationThe TATA-binding protein, TBP, is used by all three RNA polymerases and is therefore central to the process of gene expression.Missing: scientific | Show results with:scientific
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[6]
Probing TBP interactions in transcription initiation and reinitiation with RNA aptamers that act in distinct modes | PNAS### Summary of TATA-Binding Protein (TBP) from PNAS Article
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[7]
TATA-binding protein in neurodegenerative disease - PubMedThis review deals with the function of TBP in transcription and cell function. The distribution of the polyglutamine coding allele lengths in TBP of the ...
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[8]
6908 - Gene ResultTBP TATA-box binding protein [ (human)] - NCBIThis gene encodes TBP, the TATA-binding protein. A distinctive feature of TBP is a long string of glutamines in the N-terminus.Missing: exon intron
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[9]
Genomic structure of the human TATA-box-binding protein (TBP)The coding sequence is interrupted by six introns and the 5'-untranslated region (5′-UTR) of the gene by a 2.5-kb intron. A comparison of the hTBP exon/intron ...
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[10]
Homo sapiens TATA-box binding protein (TBP), transcript variant 1, mRN - Nucleotide - NCBI- **mRNA Transcript Length**: 1,857 base pairs (bp)
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[11]
TBP - TATA-box-binding protein - Homo sapiens (Human) - UniProtThe TFIID basal transcription factor complex plays a major role in the initiation of RNA polymerase II (Pol II)-dependent transcription (PubMed:33795473).
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[12]
TBP-related factors: a paradigm of diversity in transcription initiationJun 27, 2011 · In this essay we discuss a new paradigm of versatility of the transcription machinery, which involves selective factor recruitment as well as factor switching.Missing: TRF4 paper
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[13]
TRF4, the novel TBP-related protein of Drosophila melanogaster, is ...Nov 13, 2018 · Understanding the functions of TBP-related factors is essential for studying chromatin assembly and transcription regulation in higherMissing: 4 | Show results with:4
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[14]
Evolutionary history of the TBP-domain superfamily - PMC - NIHIn contrast to TBP, all other characterized examples of the TBP domain are present as single copies, primarily within multidomain proteins. The presence of the ...Missing: TRFs | Show results with:TRFs
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[15]
The TATA-Binding Protein (TBP) from the Human Fungal ...This domain displays at least 80% amino acid sequence identity among the various organisms. Residues that contact DNA (24) are almost completely conserved among ...
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[16]
TRF3, a TATA-box-binding protein-related factor, is ... - PNASTBP has bipartite structure comprising a C-terminal core domain that has been highly conserved from yeast to human and an N terminus that displays species- ...
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[17]
Early Vertebrate Evolution of the TATA-Binding Protein, TBP - PMCThe C-terminal core of the TATA-binding protein (TBP) is one of the most evolutionarily conserved protein domains known; however the TBP N-terminal region ...Isolation Of Cdna And... · Results · Functions Of The Tbp...
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[18]
p13393 · tbp_yeast - UniProtSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). Amino acids. 240 (go to sequence). Protein existence. Evidence at protein level.
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[19]
TATA element recognition by the TATA box-binding protein has ...Cocrystal structures of wild-type TATA box-binding protein (TBP) recognizing 10 naturally occurring TATA elements have been determined at 2.3–1.8 Å resolution.
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[20]
1TBP: CRYSTAL STRUCTURE OF YEAST TATA ... - RCSB PDBA model for TBP-DNA interaction is proposed with the following important features: the long dimension of the protein follows the trajectory of the minor groove.Missing: Nikolov 1992
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[21]
Phosphorylation of TFIIA Stimulates TATA Binding protein ... - PubMedPhosphorylated TFIIA was 30-fold more efficient in forming a stable complex with TBP and TATA DNA. Dephosphorylation of yeast-derived TFIIA reduced DNA binding ...Missing: 21 acetylation<|control11|><|separator|>
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[22]
Early Vertebrate Evolution of the TATA-Binding Protein, TBPThe primary structures of vertebrate N-termini indicates that, historically, this domain has undergone events involving intragenic duplication and modification ...Missing: TRFs | Show results with:TRFs
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[23]
Functional divergence of TBP homologs through distinct DNA ...Nov 7, 2024 · Despite high amino acid sequence conservation in the core domains, TBP homologs exhibited various capabilities in supporting cell viability, DNA ...
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[24]
TBP-related factors: a paradigm of diversity in transcription initiationJun 27, 2011 · TATA binding protein (TBP) is a key component of the eukaryotic transcription initiation machinery. It functions in several complexes ...
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[25]
Contribution of phenylalanine side chain intercalation to the TATA ...TATA-box binding protein (TBP) binds to the minor groove of DNA at the TATA box sequence, producing a large-scale deformation in DNA and initiating ...Missing: core domain
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[28]
Structure and mechanism of the RNA polymerase II transcription ...(C) NC2 (pink) binds TBP (yellow) and DNA to negatively regulate transcription. NC2 binds the DNA major groove and an NC2 α helix (amino acids 180–210) ...Tbp--Tfiia--Tfiib · Tfiie And Tfiih · Pol Ii Elongation Factors<|separator|>
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[29]
Positive and negative functions of the SAGA complex mediated ...In this work, we examine the function of the TFIIA N-terminal domain (NTD), an essential region of TFIIA located opposite of TBP and DNA in the TFIIA-TBP-DNA ...
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[30]
Interdependent Interactions between TFIIB, TATA Binding Protein ...A regulated two-step mechanism of TBP binding to DNA: a solvent-exposed surface of TBP inhibits TATA box recognition. Cell 108:615-627. [DOI] [PubMed] ...
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[31]
Displacement of the transcription factor B reader domain during ...Aug 8, 2018 · The B-core domain at the C-terminus of TFB/TFIIB interacts with TBP (20,23,24) as well as with the BRE sequence in the promoter (25,26), to ...
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[32]
Protein–protein interaction map for yeast TFIID - Oxford AcademicTFIID is a multi‐protein complex that contains TATA binding protein (TBP) and over a dozen different TBP associated factors (TAFs) ( 4 – 8 ). In yeast, 13 ...
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[33]
High-resolution structure of TBP with TAF1 reveals anchoring ... - NIHAug 3, 2016 · The fusion protein encoding yTAF1-TAND1-TAND2 (residues 8–71) linked to the core domain of yTBP (residues 61–270) with a (GGGS) 3 linker as well ...
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[34]
Architecture of TAF11/TAF13/TBP complex suggests novel ... - eLifeNov 7, 2017 · Interaction of TFIIA with TBP results in the exclusion of negative factors that would interfere with PIC formation, and TFIIA acts as a ...
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[35]
Cooperative action of NC2 and Mot1p to regulate TATA-binding ...TBP can be regulated negatively by the Mot1p and NC2 complexes (Pugh 2000). Mot1p is a conserved member of the Snf2p ATPase family and was initially identified ...
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[36]
Structural basis for recognition and remodeling of the TBP:DNA:NC2 ...Aug 10, 2015 · Here, we report the crystal structure of the N-terminal domain of Mot1 in complex with TBP, DNA, and the transcription regulator negative cofactor 2 (NC2).
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[37]
Probing TBP interactions in transcription initiation and reinitiation ...The TATA-binding protein (TBP) is a critical general transcription factor that associates with the core promoter and acts as a nexus for gene regulation ...
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[38]
Structural basis of preinitiation complex assembly on human Pol II ...The light and dark hues of the bars (α‐helices) and arrows (β‐sheets) represent the N‐ and C‐terminal domains, respectively. The same colors and hues are used ...Missing: TRFs | Show results with:TRFs
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[39]
Structural insights into preinitiation complex assembly on core ...Chen et al. determined the structures of human TFIID-based PIC in sequential assembly states and revealed that TFIID supports distinct PIC assembly.
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[40]
Structure of a Complete Mediator-RNA Polymerase II Pre-Initiation ...A complete, 52-protein, 2.5 million dalton, Mediator-RNA polymerase II pre-initiation complex (Med-PIC) was assembled and analyzed by cryo-electron ...
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[41]
TATA box binding protein-related factor 2Apr 13, 2021 · Taken together, these data establish that TRF2 is responsible for differentially recognizing and regulating a subset of TATA-less promoters that ...
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[43]
RNA polymerase II transcription initiation: A structural view - PNASThe N and C termini of the protein fragments used in the structural studies are labeled, and the α-helices of each cTFIIB domain are colored in order red, green ...
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[44]
TFIID Enables RNA Polymerase II Promoter-Proximal PausingMay 21, 2020 · In agreement, pausing was lost upon replacement of the TFIID complex with TATA-binding protein (TBP), and PRO-seq experiments revealed ...
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[45]
TBP-TAF Complex SL1 Directs RNA Polymerase I Pre-initiation ...Aug 19, 2005 · We demonstrate that human SL1 can direct accurate Pol I transcription in the absence of UBF and can interact with the rDNA promoter ...
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[46]
Recruitment of TATA-Binding Protein–TAFI Complex SL1 to ... - NIHUBF is a DNA binding protein with multiple HMG domains that binds directly to the CORE and UCE elements of the ribosomal DNA promoter.
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[47]
Reconstitution of Transcription Factor SL1: Exclusive Binding of TBP ...In addition, these TAFIs interact with each other to form a stable TBP-TAF complex. When TBP was bound first by either TAFI110, 63, or 48, subunits of TFIID ...
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[48]
Molecular mechanisms of Bdp1 in TFIIIB assembly and RNA ...Jul 25, 2017 · Our study provides a structural insight on how Bdp1 is assembled into TFIIIB complexes, reveals structural and functional similarities between Bdp1 and Pol II ...
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[49]
A common site on TBP for transcription by RNA polymerases II and IIITFIIIB is brought to its location in pol III promoters, upstream of the start site of transcription, by its assembly factor TFIIIC, but can also bind ...
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[50]
Transcription factor TFIIIB and transcription by RNA polymerase IIIOct 25, 2006 · The three subunits of TFIIIB, which have been a focus of our research, are TBP (TATA-box-binding protein), Brf1 and Bdp1. The 596-amino-acid ...
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[51]
Stepwise Bending of DNA by a Single TATA-Box Binding Protein - NIHWhen TBP binds to and bends the DNA, the conformation of the DNA changes and the amplitude of Brownian motion of the tethered bead is reduced compared to that ...
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[53]
SCA17, a novel autosomal dominant cerebellar ataxia caused by an ...Several lines of evidence support our conclusion that polyglutamine expansion in the TBP is pathogenic and the causative agent of a novel type of disease ...1c2 Antibody Immunoscreening... · Pcr Screening Of Expanded... · Acknowledgements
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[54]
Molecular mechanisms underlying Spinocerebellar Ataxia 17 ... - NIHWe believe that impaired transcriptional activities caused by mutant TBP with polyQ expansion is a major form of toxicity contributing to SCA17 pathogenesis, ...
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[55]
Trinucleotide repeat expansion of TATA-binding protein gene ...Low-range TBP expansions are linked to Parkinson's, with a high prevalence of PD in carriers of 41-45 repeats, especially at advanced ages. A 41 repeat seems ...Missing: TFIIB | Show results with:TFIIB
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[56]
Evidence of TAF1 dysfunction in peripheral models of X-linked ... - NIHSimilarly, altered interaction of TATA-box binding protein (TBP) to TFIIB has been shown as the molecular mechanism underlying neurodegeneration in ...
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[57]
RNA polymerase III transcription in cancer: the BRF2 connectionApr 25, 2011 · Activation of TFIIIB activity has been noted in a variety of cancers types. Increased TBP expression has been observed in a clinically ...
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[58]
TFIIB-RNA polymerase II-TFIIF preinitiation complex - PubMedE2 appears to function as an active repressor that directly inhibits HPV transcription at steps after TATA recognition by TBP or TFIID.Missing: oncogenesis | Show results with:oncogenesis
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[59]
Polyglutamine neurodegenerative diseases and regulation of ...SCA 17: neurodegeneration and the TATA-box-binding protein (TBP). Expansion of ... Protective effects of HDAC inhibitors have been reported for other ...
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[60]
Polyglutamine (PolyQ) Diseases: Navigating the Landscape of ...Jul 12, 2024 · Therefore, histone hyperacetylation triggered by inhibition of HDACs has neuroprotective effect and HDAC inhibitors have been suggested as a ...