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TIMP1

TIMP1, also known as tissue inhibitor of metalloproteinases 1, is a multifunctional encoded by the TIMP1 on the human at locus Xp11.3, which primarily functions as an endogenous inhibitor of matrix metalloproteinases (MMPs) by forming irreversible 1:1 complexes with these enzymes to regulate (ECM) degradation and tissue remodeling. The protein is broadly expressed across human tissues, with the highest levels observed in the (RPKM 344.6) and gall bladder (RPKM 211.2), and its expression is highly inducible by cytokines, hormones, and growth factors such as IL-1β, TGF-β1, EGF, and IL-6. As a member of the TIMP family—comprising four proteins (TIMP1–4) with 37–51% sequence similarity—TIMP1 features a compact structure stabilized by six bridges, forming six loop regions, and includes N-linked sites at residues 30 and 78. Its N-terminal domain is responsible for MMP inhibition, while the C-terminal domain facilitates interactions with proMMP-9, , and , enabling MMP-independent functions such as cytokine-like signaling that promotes , inhibits , and modulates cell morphology and survival. In normal physiology, TIMP1 contributes to , neuronal protection, blood-brain barrier maintenance, , and remyelination in the . TIMP1 plays diverse and context-dependent roles in , often exhibiting pleiotropic effects that can be protective or detrimental. In cancer, it is overexpressed in various malignancies and can promote tumor progression, , and resistance through CD63-mediated signaling and cancer-associated accumulation, though it may also suppress invasion in certain contexts. In fibrotic diseases, such as pulmonary and , TIMP1 enhances activation and , contributing to excessive deposition. During , it acts as a proinflammatory , influencing immune cell functions, T-cell migration in , and macrophage polarization, while in neurodegenerative conditions like and HIV-associated , it supports but shows dysregulated expression in chronic phases.

Overview

Discovery and Nomenclature

The tissue inhibitor of metalloproteinases 1 (TIMP1) was first identified in 1975 as a secreted by fibroblasts in culture, initially named human collagenase inhibitor (HCI). This discovery stemmed from studies on remodeling, where the inhibitor was found to specifically block the activity of (now known as MMP1), highlighting its role in regulating tissue degradation. Independent reports in the same year confirmed similar inhibitory activity in rabbit synovial fibroblasts, solidifying its recognition as an endogenous regulator of collagenolytic enzymes. In , TIMP1 was independently characterized for its erythroid-potentiating activity (EPA), a function that promotes the formation of erythroid colonies in cultures, leading to its initial designation based on this hematopoietic role. This activity was observed in conditioned media from a T-lymphoblast line, revealing TIMP1 as a 28 kDa capable of enhancing early erythroid progenitor growth independent of . By 1985, and sequencing demonstrated that the cDNA for the collagenase inhibitor (HCI) was identical to that of EPA, unifying these activities under a single protein entity. The official nomenclature as TIMP1 (Tissue Inhibitor of Metalloproteinases 1) emerged in the mid-1980s as research expanded to show its of a broader range of metalloproteinases beyond collagenases, including gelatinases and stromelysins, within the emerging TIMP family. This naming reflected the protein's conserved inhibitory function across species and its distinction from later-identified family members like TIMP2. The gene symbol is TIMP1, located on the at Xp11.3, with historical aliases including CLGI (collagenase ), EPA, and TIMP. Key milestones include the full cDNA cloning in 1985, which enabled detailed expression studies, and structural characterizations in the 1990s that revealed its disulfide-rich fold and inhibitory mechanism through of TIMP1-MMP complexes. These advances established TIMP1 as the founding member of the TIMP family, pivotal for understanding matrix homeostasis.

Gene and Protein Structure

The TIMP1 gene is located on the X chromosome at cytogenetic band Xp11.3 and spans approximately 4.4 kb of genomic DNA, from position 47,582,408 to 47,586,789 on the GRCh38 reference assembly. The gene consists of 5 exons in its canonical transcript (ENST00000218388) and encodes a 207-amino acid preproprotein, which includes a signal peptide for secretion. The mature TIMP1 protein, following cleavage of the 23-residue , comprises 184 and is a with an unglycosylated of approximately 21 kDa, increasing to about 28-29 kDa upon post-translational modifications. As a secreted protein, it adopts a compact, disulfide-rich fold stabilized by 12 conserved residues that form six intramolecular bonds, creating a characteristic wedge-shaped structure essential for its stability. TIMP1 features two distinct structural domains: the N-terminal domain (residues 1-70), which encompasses the inhibitory region and forms a 1:1 stoichiometric complex with the active site of matrix metalloproteinases (MMPs) via key residues around the Cys1-Cys70 disulfide bond, and the C-terminal domain (residues 71-184), which participates in binding pro-MMPs and other protein interactions. The N-terminal domain adopts a beta-barrel-like fold with extended loops, while the C-terminal domain is more flexible and contributes to the overall architecture. TIMP1 undergoes N-linked glycosylation primarily at Asn30 (with a potential secondary site at Asn78), which is crucial for proper folding, secretion, and modulation of its activity and stability. The three-dimensional structure of TIMP1 was first resolved in the late 1990s through of its complex with the catalytic domain of MMP-3 (PDB: 1UEA), revealing the inhibitory mechanism at atomic resolution; subsequent structures, including the free form (PDB: 9SOQ), confirm the conserved fold across TIMPs.

Biological Functions

Inhibition of Metalloproteinases

TIMP-1 primarily functions as a potent of matrix metalloproteinases (MMPs), which are zinc-dependent endopeptidases responsible for degrading components of the (). By forming tight complexes with these enzymes, TIMP-1 prevents excessive breakdown, thereby maintaining tissue integrity during physiological processes such as development and repair. The inhibitory mechanism involves reversible, non-covalent 1:1 between the N-terminal of TIMP-1 and the catalytic of MMPs. Specifically, the invariant residue at position 1 (Cys1) in the Met1-Cys1 loop coordinates the catalytic ion (Zn²⁺) in the MMP , displacing the nucleophilic water molecule essential for hydrolysis and thereby blocking substrate access. This interaction is further stabilized by additional contacts, including the Thr2 residue of TIMP-1 occupying the S1' specificity of the MMP, which contributes to inhibitory selectivity. Structural studies of TIMP-1 in with MMP-3 have confirmed this , highlighting the wedge-like insertion of the TIMP-1 into the MMP cleft. TIMP-1 exhibits broad inhibitory activity against all soluble MMPs, including (MMP-1), gelatinases A and B (MMP-2 and MMP-9), stromelysin-1 (MMP-3), matrilysin (MMP-7), and collagenase-3 (MMP-13). It also inhibits certain membrane-bound MMPs, such as MT1-MMP (MMP-14), albeit with lower affinity, and extends its action to a disintegrin and metalloproteinases like ADAM10, which are involved in ectodomain shedding. However, TIMP-1 shows reduced efficacy against other membrane-type MMPs, such as MMP-16 and MMP-24. In addition to direct inhibition, the C-terminal domain of TIMP-1 binds the hemopexin-like domains of pro-MMP-2 and pro-MMP-9 in a non-inhibitory manner, forming ternary complexes that can facilitate their by MT1-MMP on cell surfaces without leading to TIMP-1-mediated suppression of the activated forms. This dual role allows TIMP-1 to modulate MMP dynamics in localized microenvironments, such as during pericellular . The inhibition is equimolar and characterized by high affinity, with equilibrium dissociation constants (K_i) typically ranging from 10^{-9} to 10^{-12} M, depending on the MMP target; for example, K_i values for TIMP-1 against MMP-2 and MMP-9 are in the subnanomolar range, reflecting rapid association and slow dissociation rates. This tight binding ensures efficient stoichiometric neutralization of MMP activity . Physiologically, TIMP-1's inhibition of MMPs is essential for balancing degradation and synthesis in processes like tissue remodeling, , and embryonic development, where controlled is required for and without pathological tissue destruction. In these contexts, TIMP-1 helps prevent untimely matrix breakdown, supporting structural . Imbalances in TIMP-1 expression, such as deficiency, result in unchecked MMP overactivity, leading to excessive degradation, enhanced inflammation, and tissue damage in conditions like and tumor ; conversely, adequate TIMP-1 levels mitigate these effects by restoring proteolytic equilibrium.

Receptor Interactions and Signaling

TIMP1 interacts with several cell surface receptors primarily through its C-terminal domain, which facilitates binding to tetraspanins such as and CD82, as well as β1-integrin. These interactions form supramolecular complexes that anchor TIMP1 to the plasma membrane, distinct from its N-terminal involvement in inhibition. Additionally, TIMP1 binds to the amyloid precursor protein (APP), with the C-terminal region enabling this association via specific docking interfaces. Structural studies, including and mutagenesis, have identified key residues in TIMP1's C-terminal tail (e.g., 176-184) and CD63's large extracellular loop as critical for the TIMP1- complex formation. Binding of TIMP1 to the /β1-integrin complex activates downstream signaling pathways, including focal adhesion kinase (FAK)/ (PI3K)/Akt and (MAPK)/extracellular signal-regulated kinase (ERK), which promote , survival, and cytoskeletal reorganization. For instance, this complex enhances formation and F-actin dynamics in various cell types, supporting cell motility and resistance to anoikis. In monocytes, TIMP1-APP interaction triggers and expression of proinflammatory cytokines such as IL-6 and TNF-α, contributing to an activated . Experimental evidence from knockdown studies demonstrates that silencing or β1-integrin reduces TIMP1-mediated ERK and Akt phosphorylation, confirming the receptor dependence of these signals. Context-specific effects highlight TIMP1's role in disease-relevant processes; in cancer cells, CD63 engagement promotes and by activating PI3K and MAPK pathways, as observed in models where TIMP1 overexpression correlates with enhanced colony formation. Conversely, in neurons, TIMP1 binding to CD63 enhances Akt and (BDNF) signaling, restoring in models and potentially modulating APP processing to mitigate amyloid-β toxicity. The TIMP1-CD82 interaction, meanwhile, inhibits migration in pancreatic ductal cells by altering and increasing ATP levels, underscoring receptor-specific outcomes. These findings are supported by structural models of the TIMP1-CD63 from 2020, which inform targeted disruptions of oncogenic signaling.

Independent Cellular Roles

TIMP-1 exhibits growth-promoting effects on various types independent of its metalloproteinase inhibitory activity, functioning similarly to a or . In endothelial s, TIMP-1 stimulates and enhances , potentially through activation of signaling pathways such as PI3K/Akt, as demonstrated in studies using human microvascular endothelial cells where MMP-binding mutants of TIMP-1 retained this mitogenic capacity. Similarly, in epithelial cells like and epithelial cells, TIMP-1 promotes and via receptor-independent mechanisms, with evidence from experiments showing that TIMP-1 overexpression increases cell numbers without altering MMP activity. For erythroid cells, TIMP-1 was originally identified as erythroid-potentiating activity (EPA), directly enhancing and colony formation in human cultures through pathways involving Lyn , independent of inhibition, as confirmed by the use of TIMP-1 variants lacking MMP-binding sites. Beyond , TIMP-1 displays potent anti- properties in multiple types, particularly under conditions. In fibroblasts and tumor cells, such as those from lung adenocarcinoma and , TIMP-1 inhibits caspase-3 activation and prevents Bax translocation to the mitochondria, thereby stabilizing proteins and promoting survival; this effect persists in MMP-knockout models and with MMP-nonbinding TIMP-1 mutants, indicating a direct intracellular signaling role via pathways like /PI3K/Akt. These anti-apoptotic actions contribute to cellular resilience in inflammatory or hypoxic environments, with quantitative data showing up to 50% reduction in apoptosis rates in TIMP-1-treated fibroblasts exposed to deprivation. TIMP-1 also exerts other specialized effects unrelated to remodeling. In adrenocortical cells, ACTH induces TIMP-1 expression, leading to inhibition of collagenase activity in bovine models. Additionally, in the , TIMP-1 supports neuronal survival during inflammation by protecting against excitotoxic damage and promoting Bcl-xL/Bcl-2 stabilization, as observed in human neuronal cultures and astrocytic responses to CNS injury, where MMP-deficient conditions still yielded neuroprotective outcomes. Evidence for these MMP-independent roles is robustly supported by experimental models, including TIMP-1 mutants defective in MMP binding that nevertheless stimulate and inhibit , and studies in MMP-knockout mice where TIMP-1 overexpression alone drives cellular effects like reduced neuronal loss. In pathophysiological contexts, these functions enable TIMP-1 to inhibit by blocking endothelial through PTEN without involvement, and to facilitate tumor stroma remodeling by enhancing epithelial-mesenchymal transition and survival in cancer microenvironments. Some proliferative effects may overlap with receptor-mediated signaling, but the core mechanisms here emphasize direct cellular modulation.

Expression and Regulation

Tissue Distribution and Expression Patterns

TIMP1 exhibits broad expression across most adult human tissues, with the highest levels observed in the (RPKM 344.6) and gall bladder (RPKM 211.2), and notable expression in reproductive organs such as the and , as well as in the liver, , and other reproductive tissues. In the , expression is particularly enriched in the and . This pattern reflects its role in maintaining homeostasis under normal conditions, where it remains inducible in response to injury or stress. In the developing gonads, it is prominently expressed in containing Sertoli cells and primordial germ cells. These temporal patterns highlight its involvement in , with expression levels increasing transiently to regulate matrix dynamics during critical growth phases. TIMP1 is primarily secreted by stromal cells such as fibroblasts, vascular endothelial cells, macrophages, and various tumor cells within tissues. As an X-linked gene, it displays mosaic expression patterns in females due to random X-chromosome inactivation, resulting in heterogeneous cellular expression within the same tissue. This mosaicism contributes to variability in TIMP1 distribution at the single-cell level. In healthy adults, circulating plasma levels of TIMP1 typically range from 80 to 200 ng/mL. These levels increase during pregnancy, reaching medians of approximately 555 ng/mL in early pregnancy (7-11 weeks), reflecting heightened matrix regulation demands. Detection of TIMP1 expression commonly involves reverse transcription polymerase chain reaction (RT-PCR) for mRNA quantification in tissues and enzyme-linked immunosorbent assay (ELISA) or immunohistochemistry for protein assessment in plasma and cellular contexts.

Molecular Regulatory Mechanisms

The expression of TIMP1 is tightly regulated at multiple levels, including transcriptional, hormonal, epigenetic, and post-transcriptional mechanisms, which collectively determine its levels in response to cellular and environmental cues. At the transcriptional level, the TIMP1 promoter contains binding sites for key transcription factors such as AP-1, , and , enabling rapid induction in response to inflammatory and growth signals. Cytokines like interleukin-1 (IL-1), tumor necrosis factor-α (TNF-α), and transforming growth factor-β (TGF-β) activate these sites, leading to upregulated TIMP1 transcription in various cell types, including fibroblasts and macrophages. Similarly, growth factors such as (PDGF) and (EGF) stimulate TIMP1 expression through synergistic interactions with these promoter elements, often in the context of tissue remodeling. Hormonal regulation further modulates TIMP1 in a tissue-specific manner, particularly in reproductive and endocrine systems. and progesterone upregulate TIMP1 in uterine and mammary tissues, promoting stability during cyclical changes and . In cells, (ACTH) induces TIMP1 expression via the cAMP/ (PKA) signaling pathway, which enhances transcription and inhibits collagenase activity to maintain adrenal integrity. Epigenetic modifications also play a critical role in controlling TIMP1 expression, with variability influenced by and states. As an X-linked gene, TIMP1 undergoes X-chromosome inactivation in females, resulting in expression levels comparable to those in males from the single active , though polymorphic escape from inactivation can lead to dosage differences in certain cell types. In some cancers, such as , promoter hypermethylation silences TIMP1, reducing its tumor-suppressive functions. Post-transcriptional regulation fine-tunes TIMP1 levels through mRNA stability and (miRNA) interactions. The HuR stabilizes TIMP1 mRNA by binding to AU-rich elements in its 3' untranslated region (3'UTR), prolonging its half-life during inflammatory responses. Conversely, miRNAs such as miR-1293 target the TIMP1 3'UTR, repressing translation and contributing to lower expression in contexts like cancer progression. Feedback mechanisms and genetic variants add layers of complexity to TIMP1 regulation. Matrix metalloproteinases (MMPs) can indirectly upregulate TIMP1 by cleaving components, releasing sequestered cytokines that activate TIMP1 transcription. Additionally, the rs4898 (372 T>C) in the TIMP1 gene influences protein expression levels, with the C allele associated with higher TIMP1 production and altered disease susceptibility.

Clinical and Pathophysiological Significance

Roles in Disease Processes

TIMP1 dysregulation plays a pivotal role in cancer , where elevated levels often correlate with enhanced tumor progression. In , particularly triple-negative subtypes, high TIMP1 expression is associated with aggressive disease and poor patient outcomes, promoting and resistance to through non-canonical signaling pathways. Similarly, in , TIMP1 serves as an early , with overexpression facilitating tumor invasion and by modulating the and interacting with on cancer cells. In , upregulated TIMP1 in tumor tissues and plasma is linked to lymph node involvement, distant , and reduced survival rates, as it shifts the MMP/TIMP balance to favor stromal remodeling that supports tumor dissemination. TIMP1 also contributes to adverse in specific malignancies, such as laryngeal , where increased TIMP1 levels in tumor tissues predict shorter overall survival and higher recurrence risk. In , elevated circulating TIMP1 is observed in advanced stages, correlating with invasive behavior and poorer clinical outcomes, potentially through dual modulation of matrix degradation and pro-survival signals in cells. In fibrotic disorders, TIMP1 overexpression inhibits degradation by binding MMPs, leading to excessive accumulation and tissue stiffening. In liver fibrosis, such as that induced by chronic injury, hepatic TIMP1 upregulation exacerbates scar formation by suppressing MMP activity, resulting in persistent fibrotic foci even after injury resolution. models, including those triggered by silica or , show similar patterns, with TIMP1 derived from fibroblasts promoting alveolar remodeling and progression to irreversible damage. Cardiac post-myocardial or pressure overload involves elevated TIMP1 in cardiomyocytes and fibroblasts, which sustains deposition and impairs ventricular function, as demonstrated in hypertensive models where TIMP1 blockade reduces scar size. TIMP1 dysregulation contributes to neuroinflammatory conditions through altered MMP/TIMP ratios that affect blood-brain barrier integrity and immune cell infiltration. In , an imbalance favoring MMPs over TIMP1 in active lesions promotes demyelination and axonal damage, while compensatory TIMP1 elevation in chronic s may limit repair but correlates with disease progression. In , elevated MMP-9/TIMP1 ratios in the acute exacerbate hemorrhagic and neuronal , with TIMP1 insufficiency worsening infarct expansion. TIMP1 knockout mice exhibit heightened in models of or demyelination, showing increased microglial activation and impaired regeneration due to unchecked proteolytic activity. In pregnancy complications, TIMP1 dysregulation disrupts invasion and spiral remodeling, essential for placental development. In , elevated placental and maternal TIMP1 levels inhibit MMP-mediated breakdown, leading to shallow invasion and vascular dysfunction, particularly in early-onset cases. This imbalance is also implicated in , where altered TIMP1 expression in and correlates with premature and reduced fetal growth, as seen in associated with . Beyond these, TIMP1 is involved in , a linked to chewing, where increased TIMP1 in subepithelial tissues inhibits collagenolysis, promoting juxta-epithelial and . In conjunctivochalasis, TIMP1 overexpression in conjunctival fibroblasts contributes to redundant tissue folding and tear film instability by limiting MMP-driven tissue turnover. TIMP1 exhibits context-dependent effects on : while it can inhibit signaling to exert anti-angiogenic actions in some fibrotic settings, in tumors it often promotes pro-angiogenic microenvironments through cytokine-like functions, highlighting its dual role in pathology. Animal models underscore these mechanisms; TIMP1-/- mice display enhanced tumor progression in and colon carcinoma xenografts, with increased due to reduced matrix barriers and heightened invasive potential. Conversely, these knockouts show attenuated in chronic injury models, such as carbon tetrachloride-induced liver damage or dextran sulfate sodium , where diminished TIMP1 allows greater MMP-mediated resolution and reduced scar formation.

Diagnostic and Therapeutic Implications

TIMP1 serves as a promising for various diseases due to its involvement in remodeling and . Elevated levels of TIMP1, often exceeding 300 ng/mL as measured by , have been associated with poor prognosis in multiple cancers, including breast, endometrial, and lung carcinomas. For instance, in , high TIMP1 correlates with reduced overall survival and increased tumor aggressiveness. Similarly, in colorectal liver metastases, extravesicular TIMP1 in plasma acts as a non-invasive prognostic indicator, with higher levels predicting worse outcomes independent of other clinical factors. In fibrotic conditions, the urinary TIMP1/ ratio provides utility for staging renal interstitial and assessing disease progression. Studies in show a decreased MMP-9/TIMP-1 ratio in urine, reflecting imbalanced matrix degradation and accumulation, which correlates with advancing fibrosis severity. This ratio has also been elevated in acute cases leading to renal scarring, highlighting TIMP1's role in early fibrotic detection. For inflammatory diseases like , synovial and serum TIMP1 levels are significantly raised compared to healthy controls, aiding in and joint destruction. Therapeutically, TIMP1's dual functions—both inhibiting matrix metalloproteinases to curb excessive degradation and promoting fibrosis or tumor survival—pose challenges for targeted interventions. In preclinical models of excessive MMP activity, such as inflammatory pain and arthritis-like conditions, recombinant murine TIMP1 administration has reduced and tissue damage by restoring matrix balance. Conversely, anti-TIMP1 strategies aim to mitigate its pro-tumorigenic effects; for example, TIMP1 knockdown in cells decreases stiffness and tumor invasion via reduced tenascin C and expression. approaches, including TIMP1 deficiency via genetic deletion, have attenuated in liver and models by modulating immune-related genes and inflammatory pathways. Recent advances emphasize TIMP1's integration into liquid biopsy panels for enhanced prognostic accuracy in cancer. TIMP1 mRNA in tumor-educated platelets and circulating tumor cells has emerged as a diagnostic for colorectal and cancers, respectively, enabling non-invasive monitoring of progression and . In , targeting TIMP1 through upstream regulators like Sp1 inhibition shows preclinical promise for reducing immune infiltration and tumor growth, though no phase I trials specifically for TIMP1 inhibitors were identified as of 2025. While direct clinical trials modulating TIMP1 remain limited, its inclusion in multi-analyte panels supports ongoing efforts in personalized and management.

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