Varimax rotation
Varimax rotation is an orthogonal rotation technique in exploratory factor analysis that maximizes the variance of the squared factor loadings for each factor, aiming to produce a simpler and more interpretable structure by enhancing high loadings and suppressing low ones on variables.[1] Developed by statistician Henry F. Kaiser and published in 1958, it serves as an analytic criterion to achieve approximate simple structure in factor solutions, reducing subjectivity compared to earlier graphical rotation methods.[1] The approach maintains the total variance explained by the factors while rotating the axes orthogonally, ensuring that the resulting factors remain uncorrelated.[2]
Mathematically, Varimax optimizes a criterion function that sums, over each factor, the difference between the average squared loading and the square of the average loading, often applied to normalized loadings to account for communality and promote invariance across different test batteries.[1] This iterative process, typically converging in a few steps, begins with an initial unrotated solution (such as from principal axis factoring) and adjusts pairwise rotations between factors to maximize the objective.[2] Unlike oblique rotations like oblimin, which allow correlated factors, Varimax enforces perpendicularity, making it suitable for scenarios where theoretical independence among factors is assumed.[2]
Widely adopted in psychological, social, and behavioral research, Varimax rotation is considered one of the most prevalent orthogonal methods due to its effectiveness in clarifying relationships among observed variables and latent constructs, particularly in principal components analysis follow-ups.[3] Its enduring popularity stems from computational simplicity and the interpretability it provides, even as modern alternatives emerge, though it assumes an orthogonal factor model that may not always align with complex data structures.[4]
Background in Factor Analysis
Overview of Factor Analysis
Factor analysis is a multivariate statistical technique used to identify underlying latent factors that account for observed correlations among a set of variables, thereby reducing dimensionality while preserving essential information about their interrelationships.[5] Originating in psychometrics, it posits that the variance in observed variables can be explained by a smaller number of unobserved common factors plus unique factors specific to each variable. This method is particularly valuable in fields like psychology and social sciences for uncovering hidden structures in data, such as intelligence components or personality traits.
The technique traces its roots to Charles Spearman's 1904 work, where he introduced the concept of a general intelligence factor (g) to explain positive correlations among cognitive tests, marking the first formal application of factor analysis.[6] Spearman's two-factor theory emphasized a single overarching factor alongside specific abilities. Later developments by Louis L. Thurstone in the 1930s expanded this to multiple factor analysis, proposing several independent primary mental abilities rather than a unitary g factor, as detailed in his 1935 book The Vectors of Mind.[7] These foundational contributions shifted factor analysis from a simple hierarchical model to more flexible multidimensional frameworks.
Mathematically, factor analysis is represented by the model \mathbf{X} = \boldsymbol{\Lambda} \mathbf{F} + \boldsymbol{\epsilon}, where \mathbf{X} is the vector of observed variables, \boldsymbol{\Lambda} is the factor loading matrix indicating the relationship between variables and factors, \mathbf{F} is the vector of common factors (assumed to have mean zero and unit variance), and \boldsymbol{\epsilon} is the vector of unique errors or specific variances (uncorrelated with \mathbf{F} and among themselves).[2] This equation decomposes the covariance structure of \mathbf{X} into common and unique components, with the goal of estimating \boldsymbol{\Lambda} and the diagonal matrix of unique variances \boldsymbol{\Psi}.
The process involves several key steps, beginning with factor extraction to determine the initial factor loadings. Common extraction methods include principal axis factoring, which iteratively estimates communalities (the proportion of variance in a variable explained by the common factors) and focuses on shared variance by placing these estimates on the diagonal of the correlation matrix, and maximum likelihood estimation, which assumes multivariate normality and maximizes the likelihood of observing the sample covariance matrix under the factor model. Communalities are estimated either iteratively or via initial approximations like squared multiple correlations, leading to an initial loadings matrix that represents the unrotated solution. Rotation techniques are then applied to this matrix to enhance interpretability, though details of rotation are addressed elsewhere.[5]
Factor analysis encompasses two primary approaches: exploratory factor analysis (EFA), which is data-driven and used to discover the underlying factor structure without preconceived hypotheses, and confirmatory factor analysis (CFA), which tests a specified model against data using structural equation modeling. EFA, the focus here, is inductive and flexible, allowing researchers to explore patterns in correlations to identify the number and nature of factors, making it suitable for theory-building stages where rotation plays a key role in achieving simple structure.[8] In contrast, CFA is deductive and hypothesis-testing, evaluating fit for predefined models.[9]
Purpose and Types of Rotation
Rotation in factor analysis is applied after initial factor extraction to simplify the factor loading matrix and enhance interpretability, by redistributing the variance among the factors while preserving the total amount of explained variance and the error structure of the model. This process addresses the inherent indeterminacy of the factor model, where multiple equivalent solutions can explain the data equally well, allowing researchers to select a configuration that aligns more closely with theoretical expectations or empirical patterns. The primary objective is to achieve a clearer delineation of factors, making it easier to assign substantive meaning to each one based on the pattern of variable loadings.
A key goal of rotation is to approximate "simple structure," an ideal configuration in which each observed variable loads highly on one factor and near-zero on the others, while each factor is defined by a subset of variables with substantial loadings. This criterion, originally articulated by Thurstone, promotes patterns where factors are distinct and non-overlapping, reducing ambiguity in interpreting the latent dimensions underlying the data. Harman further elaborated on simple structure as a practical target for rotation, emphasizing its role in facilitating psychological or theoretical interpretation without altering the model's fit to the observed correlations.[10]
Rotations are broadly categorized into orthogonal and oblique types, differing in their assumptions about the relationships among factors. Orthogonal rotations constrain the factors to be uncorrelated, thereby maintaining the initial total variance distribution across factors as extracted; this preserves mathematical invariance under the transformation \Lambda' = \Lambda T, where \Lambda is the original loading matrix and T is an orthogonal matrix satisfying T^T T = I. In contrast, oblique rotations allow factors to be correlated, which can yield more realistic representations of interrelated constructs but may redistribute variance in ways that slightly alter the total explained amount per factor.[10]
Examples of orthogonal rotations include equamax and quartimax criteria. Equamax, developed as a balanced approach to simplifying both rows (variables) and columns (factors) in the loading matrix, seeks to minimize overall complexity while equalizing contributions from variables and factors. Quartimax, an earlier method, prioritizes simplicity across variables by maximizing the variance of squared loadings per row, often resulting in general factors with distributed loadings. For oblique rotations, prominent examples are promax and oblimin. Promax provides a computationally efficient approximation to oblique simple structure by raising varimax-rotated loadings to a power (typically 4) before applying a Procrustes transformation. Oblimin, a more general family, minimizes a complexity function that penalizes high cross-loadings while allowing adjustable degrees of factor correlation through a parameter \gamma.
Core Definition
Varimax rotation, introduced by Henry F. Kaiser in 1958, is an orthogonal rotation method in factor analysis designed to maximize the sum of the variances of the squared loadings across the columns of the loading matrix.[11] This approach simplifies the factor structure by redistributing the loadings to emphasize distinct patterns for each factor while preserving the orthogonality of the factors, meaning they remain uncorrelated.[11]
The primary goal of Varimax rotation is to achieve a simpler factor structure where each factor exhibits a few high loadings on a subset of variables and many near-zero loadings on the others, thereby improving the psychological or substantive interpretability of the extracted factors.[11] By concentrating the variance of squared loadings within individual factors, it helps researchers identify clearer substantive meanings for the factors, such as grouping related variables more cohesively.[12]
Varimax was developed to address limitations in earlier rotation criteria like quartimax, which prioritized sparsity across variables (rows of the loading matrix) over factors (columns), often leading to less interpretable factor-specific patterns.[1] A key property of the Varimax solution is its uniqueness up to sign flips of individual factors and permutations among the factors themselves.[13]
For instance, in factor analysis of personality trait data, Varimax rotation can separate underlying dimensions such as extraversion (high loadings on sociable and energetic items) and neuroticism (high loadings on anxious and moody items), making the factors more distinct and easier to interpret.[14]
Objective Function and Optimization
The Varimax rotation criterion is defined as an optimization problem that maximizes the following objective function:
V = \frac{1}{p} \sum_{j=1}^m \left[ \sum_{i=1}^p {\lambda'_{ij}}^4 - \frac{1}{p} \left( \sum_{i=1}^p {\lambda'_{ij}}^2 \right)^2 \right]
where \Lambda' = \Lambda T is the rotated loading matrix, \Lambda is the initial p \times m loading matrix with p variables and m factors, T is an m \times m orthogonal rotation matrix (T^T T = I), and \lambda'_{ij} are the elements of \Lambda'. Here, \lambda'_{ij} typically denotes normalized loadings \tilde{\lambda}'_{ij} = \lambda'_{ij} / \sqrt{h_i} to account for communality h_i, as in the original formulation, though unnormalized versions exist.[11] This formulation, introduced by Kaiser, promotes simple structure by favoring loadings that are either large in magnitude (close to \pm 1) or near zero, thereby enhancing interpretability in factor analysis.[11]
The objective function V represents the sum over factors of the variances of the squared loadings within each factor column of \Lambda'.[11] Specifically, for each factor j, the inner expression \sum_i {\lambda'_{ij}}^4 - \frac{1}{p} \left( \sum_i {\lambda'_{ij}}^2 \right)^2 equals p times the variance of the vector \{ {\lambda'_{ij}}^2 : i=1,\dots,p \}. Thus, V = \sum_j \operatorname{Var}_j(\{ {\lambda'_{ij}}^2 \}). Maximizing V thus increases the variability of these squared loadings per factor, which is equivalent to minimizing the overall complexity of the factor pattern by concentrating variance in fewer non-zero loadings per row and column.[11]
The optimization problem is nonlinear and non-convex, as V is a quartic function over the compact Stiefel manifold of orthogonal matrices. A matrix formulation expresses the maximization as finding orthogonal T that solves \operatorname{trace}(T^T \Lambda^T [D](/page/D*) \Lambda T) = \max, where D is an m \times m diagonal matrix with entries d_{jj} = \sum_i {\lambda'_{ij}}^2 ({\lambda'_{ij}}^2 - (1/p) \sum_i {\lambda'_{ij}}^2), but D depends on the current estimate of T, necessitating iterative updates.[15] Solutions typically employ gradient-based methods on the manifold or approximations via successive two-dimensional plane rotations and eigenvalue decompositions of two-by-two submatrices to approximate a local maximum.[11]
A uniqueness theorem guarantees the existence of a solution due to the compactness of the orthogonal group, with the maximizer unique up to permutation and sign flips of the factors under non-degenerate conditions (e.g., distinct factor variances and leptokurtic loading distributions). Degenerate cases, such as identical factors or zero communalities, may yield multiple equivalent solutions.[11]
Algorithm and Computation
Iterative Procedure
The iterative procedure for Varimax rotation is an optimization algorithm that successively refines an orthogonal transformation matrix T to maximize the Varimax criterion V, typically starting from an initial factor loading matrix \Lambda obtained from extraction methods such as principal component analysis or principal factor analysis. The algorithm employs pairwise planar rotations between factors to achieve this maximization, ensuring the rotated loadings \Lambda' = \Lambda T exhibit greater variance in their squared values per factor, thereby enhancing interpretability. This approach, originally proposed by Kaiser, operates on the unnormalized or normalized loadings (divided by communalities for invariance) and maintains orthogonality throughout.[1][16]
Initialization begins with the identity matrix as T = I, yielding initial rotated loadings \Lambda' = \Lambda. The procedure then enters an iterative loop where, for the current \Lambda', all unique pairs of factors ( r(r-1)/2 pairs for r factors) are considered. For each pair of factors j and k, the optimal rotation angle \phi in their 2D plane is computed analytically to locally maximize V. The angle is given by
\phi = \frac{1}{4} \arctan \left( \frac{ \sum_i 2 x_i y_i (x_i^2 - y_i^2) }{ \sum_i [(x_i^2 - y_i^2)^2 - (2 x_i y_i)^2 ] - \left\{ \left[ \sum_i (x_i^2 - y_i^2) \right]^2 - \left[ \sum_i 2 x_i y_i \right]^2 \right\} } \right),
where x_i and y_i are the normalized loadings of variable i on factors j and k, respectively (i.e., x_i = \lambda'_{i j} / h_i, y_i = \lambda'_{i k} / h_i, with h_i the communality of variable i), and the sums are over the p variables.[1][17] This formula derives from setting the derivative of the two-factor Varimax criterion to zero and solving for the angle that increases V. The 2D rotation matrix
\begin{pmatrix} \cos \phi & -\sin \phi \\ \sin \phi & \cos \phi \end{pmatrix}
is then applied to the corresponding columns of \Lambda', and T is updated by post-multiplying the appropriate 2D rotation block (zero elsewhere). After processing all pairs in a full cycle, the change in V is evaluated.[16]
The loop continues until convergence, defined as successive rotations yielding \phi = 0 for all pairs or the change in V falling below a small threshold \epsilon (e.g., $10^{-6}), while also verifying orthogonality of T (e.g., via T^T T \approx I). Due to the possibility of converging to a local maximum, it is recommended to run the algorithm with multiple random initializations (e.g., 10 starts) to obtain a more robust solution. The algorithm typically converges in 20-50 iterations for standard datasets with moderate p and r. An alternative matrix-based update, useful for larger r, computes a diagonal matrix B with b_{jj} = \sum_i \lambda'_{ij}^2 / p from the current \Lambda', forms the symmetric matrix \Lambda^T (I - B) \Lambda, obtains its SVD as U S V^T, and sets T_{\text{new}} = T U V^T (or equivalently T U if V = I) to project along the gradient direction before repeating. This step approximates a full optimization over all factors simultaneously.[18]
The following pseudocode outlines the pairwise implementation:
initialize T = identity(r, r)
converged = false
max_iter = 100 # safety limit
while not converged and iter < max_iter:
Lambda_prime = Lambda * T
old_V = compute_V(Lambda_prime) # Varimax criterion
for each pair (j, k) with j < k:
# Extract and normalize loadings for pair
x = Lambda_prime[:, j] ./ sqrt(communalities)
y = Lambda_prime[:, k] ./ sqrt(communalities)
# Compute angle phi using the arctan formula
num = sum(2 * x .* y .* (x.^2 - y.^2))
den_part1 = sum( (x.^2 - y.^2).^2 - (2 * x .* y).^2 )
sum_diff = sum(x.^2 - y.^2)
sum_prod = sum(2 * x .* y)
den_part2 = (sum_diff)^2 - (sum_prod)^2
den = den_part1 - den_part2
phi = (1/4) * atan(num / den)
if abs(phi) > 1e-10:
# Apply 2D rotation to columns j and k of Lambda_prime using temps
old_j = Lambda_prime[:, j]
old_k = Lambda_prime[:, k]
c = cos(phi); s = sin(phi)
Lambda_prime[:, j] = c * old_j + s * old_k
Lambda_prime[:, k] = -s * old_j + c * old_k
# Update T with corresponding block rotation
rot_block = [c s; -s c]
T[:, [j, k]] = T[:, [j, k]] * rot_block'
new_V = compute_V(Lambda_prime)
if abs(new_V - old_V) < epsilon:
converged = true
iter += 1
return T
initialize T = identity(r, r)
converged = false
max_iter = 100 # safety limit
while not converged and iter < max_iter:
Lambda_prime = Lambda * T
old_V = compute_V(Lambda_prime) # Varimax criterion
for each pair (j, k) with j < k:
# Extract and normalize loadings for pair
x = Lambda_prime[:, j] ./ sqrt(communalities)
y = Lambda_prime[:, k] ./ sqrt(communalities)
# Compute angle phi using the arctan formula
num = sum(2 * x .* y .* (x.^2 - y.^2))
den_part1 = sum( (x.^2 - y.^2).^2 - (2 * x .* y).^2 )
sum_diff = sum(x.^2 - y.^2)
sum_prod = sum(2 * x .* y)
den_part2 = (sum_diff)^2 - (sum_prod)^2
den = den_part1 - den_part2
phi = (1/4) * atan(num / den)
if abs(phi) > 1e-10:
# Apply 2D rotation to columns j and k of Lambda_prime using temps
old_j = Lambda_prime[:, j]
old_k = Lambda_prime[:, k]
c = cos(phi); s = sin(phi)
Lambda_prime[:, j] = c * old_j + s * old_k
Lambda_prime[:, k] = -s * old_j + c * old_k
# Update T with corresponding block rotation
rot_block = [c s; -s c]
T[:, [j, k]] = T[:, [j, k]] * rot_block'
new_V = compute_V(Lambda_prime)
if abs(new_V - old_V) < epsilon:
converged = true
iter += 1
return T
This structure ensures monotonic increase in V per cycle, with the pairwise updates providing a transparent path to the optimum.[1][16]
Normalization and Convergence
Kaiser normalization is an optional preprocessing step in the Varimax rotation procedure, involving the division of each row in the factor loading matrix by the square root of the variable's communality to equalize the influence of variables during optimization. The normalized loading for variable i and factor j is computed as
\lambda_{ij}^{\text{norm}} = \frac{\lambda_{ij}}{\sqrt{h_i^2}},
where h_i^2 = \sum_j \lambda_{ij}^2 represents the communality of variable i, or the proportion of its variance explained by the factors. This adjustment extends the common factor component of each variable vector to unit length before rotation, thereby removing bias introduced by differing communalities and ensuring that variables contribute equally regardless of their initial loading magnitudes.[1]
By preventing variables with higher communalities from disproportionately influencing the rotation, Kaiser normalization promotes a more balanced maximization of the Varimax criterion and enhances the alignment with simple structure criteria. After rotation, the loadings are rescaled by multiplying back by \sqrt{h_i^2} to restore their original metric. This approach is the default in numerous statistical software implementations, including SPSS, where it aids in achieving stable solutions across samples, and Stata, which applies it to orthogonal rotations like Varimax unless specified otherwise.[1][5][19]
The iterative nature of Varimax rotation requires defined stopping rules to ensure computational efficiency and reliability. Convergence is commonly assessed by tracking the delta in the Varimax objective function V, halting when \Delta V < 10^{-6}, or upon reaching a maximum of 1000 iterations to avoid excessive computation without meaningful improvement. Alternatively, some implementations monitor the change in the rotation matrix or loadings themselves, with tolerances around $10^{-5} to $10^{-6}, reflecting the algorithm's guaranteed non-decreasing progression toward a local maximum.[20][21]
Numerical stability in Varimax rotation can be compromised with ill-conditioned loading matrices, particularly when factors are nearly collinear or communalities are low. To mitigate this, practitioners often initialize the rotation from an identity matrix (unrotated solution) and incorporate regularization techniques, such as ridge penalties on the loading matrix, to condition the problem before optimization. An empirical guideline recommends applying Kaiser normalization when the number of variables exceeds three times the number of factors, as this supports robust variable-factor ratios for interpretable structures without undue distortion from uneven communalities.[19]
Properties and Applications
Interpretability and Invariance
Varimax rotation enhances the interpretability of factors in exploratory factor analysis by promoting a "simple structure," in which each factor exhibits a few high loadings (close to ±1) and many near-zero loadings, creating polar patterns that facilitate clear factor naming and validation.[11] This approach simplifies the factor loading matrix, making it easier to associate factors with substantive constructs in fields such as psychology and economics, where initial unrotated solutions often yield entangled loadings that obscure meaningful interpretations.[11] For instance, in analyses of IQ test data, Varimax can transform initially diffuse loadings across verbal comprehension and perceptual reasoning subtests into distinct factors, such as a verbal factor with high loadings on vocabulary and information items and a quantitative factor emphasizing arithmetic and matrix reasoning tasks, thereby aiding in the identification of underlying cognitive abilities.
A key strength of Varimax lies in its invariance properties, which ensure stability across different analyses. The solution remains invariant to changes in variable scales, factor sign flips, and permutations of factor order, as the optimization criterion focuses on variances of squared loadings without dependence on absolute orientations.[11] Additionally, as an orthogonal rotation, Varimax preserves the total variance explained by the factors and the communalities (the proportion of each variable's variance attributable to the common factors), maintaining the overall fit of the model while redistributing variance for clarity.[22] These properties contribute to factorial invariance, particularly robust for pure factor clusters, allowing consistent interpretations even when the test battery composition varies.[11]
However, the interpretability benefits of Varimax are contingent on its orthogonal assumption, which posits uncorrelated factors; this may not hold for real-world constructs that exhibit correlations, potentially leading to oversimplified or misleading structures in such cases. To guide factor retention and interpretation, researchers often apply guidelines such as retaining factors with eigenvalues greater than 1 (Kaiser's criterion), which indicates factors accounting for more variance than a single variable, alongside visual inspection via scree plots to identify the "elbow" where eigenvalues level off.
Advantages and Limitations
Varimax rotation offers several advantages in exploratory factor analysis (EFA), particularly in its computational efficiency. As an orthogonal method, it avoids the additional complexity of estimating factor correlations required by oblique rotations, making it faster and less resource-intensive for large datasets.[23] This efficiency stems from the constraint of maintaining uncorrelated factors, which simplifies the optimization process compared to methods like direct oblimin.[22] Furthermore, Varimax is widely implemented in standard statistical software, including SPSS, SAS, and R, facilitating its routine application across research fields.[24]
The technique produces uncorrelated factors that enhance interpretability by maximizing high and low loadings while minimizing intermediate values, which is particularly suitable for index construction where factor independence is theoretically assumed.[25] Empirically, Varimax enhances interpretability in EFA by simplifying loading patterns and promoting replicable solutions, as demonstrated in comparisons with unrotated factors where it yields more parsimonious structures.[25]
Despite these strengths, Varimax has notable limitations. By enforcing orthogonality, it can oversimplify complex data structures, forcing uncorrelated factors even when underlying dimensions are interrelated, which may distort interpretations in domains like personality research where traits often exhibit intercorrelations (e.g., average absolute correlations of 0.23 between Big Five factors).[26] This assumption of independence is frequently unrealistic, leading to less accurate representations of correlated constructs compared to oblique alternatives.[25] Additionally, the method is sensitive to the number of factors extracted; over- or under-extraction can redistribute variance unevenly, resulting in unstable or misleading loadings.[27]
Varimax is most appropriate for exploratory analyses where theoretical models predict orthogonal factors, such as in cognitive ability testing with distinct abilities; however, if correlations between factors are expected, oblique rotations like oblimin are preferable to capture realistic interrelationships.[25] Empirical studies support this guidance: in simulations with interrelated constructs, Varimax explained only 56% of variance with lower reliability (MSA = 0.500), while oblimin variants performed better, though Varimax excelled in scenarios assuming independence.[28]
Relative to Promax, an oblique method that approximates Varimax by relaxing orthogonality after initial rotation, Varimax is less effective for correlated factors but provides a foundational step for such approximations; Promax typically yields higher reliability (MSA = 0.882) and greater variance explained (59%), making it superior when inter-factor correlations range from 0.624 to 0.713.[28]
Implementations in Software
Statistical Packages
Varimax rotation is implemented in several major statistical software packages, providing users with built-in functions for orthogonal rotation in exploratory factor analysis. These implementations typically integrate with factor extraction methods and offer options for normalization and output customization.
In IBM SPSS Statistics, the FACTOR command supports Varimax rotation via the /ROTATION=VARIMAX subcommand, often paired with principal axis factoring using /METHOD=PAF. By default, Kaiser normalization is applied during rotation to standardize loadings, and the procedure outputs a rotated component matrix showing factor loadings, along with communalities and variance explained. The maximum number of iterations for rotation is set to 25 by default, with convergence based on a criterion of 10^{-6} for changes in the rotation matrix.[5]
SAS implements Varimax rotation in PROC FACTOR using the ROTATE=VARIMAX option, which can follow extraction methods like principal components or maximum likelihood. The procedure integrates with PROC CORR for correlation matrix input. Outputs include rotated loadings, eigenvalues, and proportions of variance, with default convergence for rotation at 10^{-9} and a maximum of max(10 × number of variables, 100) iterations.[29][30]
In Stata, Varimax rotation is available as a postestimation command following the factor command, invoked with rotate, varimax. This applies orthogonal rotation to the retained factors. The Kaiser-Meyer-Olkin measure of sampling adequacy is available via estat kmo after the factor command. Outputs display rotated loadings, uniqueness values, and a rotation matrix.[31][19]
Default settings for Varimax rotation vary across packages, typically involving 25 to 100 iterations and convergence criteria around 10^{-6} to 10^{-9} for matrix changes, producing outputs such as eigenvalues, rotated loadings tables, and explained variance percentages to aid interpretation.
For accessibility in open-source environments, free tools like jamovi include Varimax rotation in its Exploratory Factor Analysis module under the jmv package, selectable alongside options like oblimin, with outputs mirroring those of proprietary software.[32]
Programming Languages
In the R programming language, the psych package implements Varimax rotation through its fa() function, which performs factor analysis with optional orthogonal rotation to enhance interpretability of loadings.[33] Users specify the rotation method via the rotate parameter, setting it to "varimax" for the standard orthogonal Varimax procedure, and can enable Kaiser normalization with normaliz=TRUE to scale loadings by communality before rotation.[33] An example invocation for a dataset with three factors is:
r
library(psych)
fa_result <- fa(data, nfactors=3, rotate="varimax", normaliz=TRUE)
fa.diagram(fa_result)
library(psych)
fa_result <- fa(data, nfactors=3, rotate="varimax", normaliz=TRUE)
fa.diagram(fa_result)
This outputs rotated loadings and allows visualization via fa.diagram() for factor structure diagrams.[33]
In Python, the factor_analyzer library provides straightforward support for Varimax rotation within exploratory factor analysis via the FactorAnalyzer class, which can be installed using pip install factor_analyzer.[20] The rotation parameter is set to 'varimax' during initialization for orthogonal rotation that maximizes loading variances, followed by fitting and transforming the data to obtain factor scores.[20] A basic example is:
python
from factor_analyzer import FactorAnalyzer
fa = FactorAnalyzer(n_factors=3, rotation='varimax')
fa.fit(data)
factor_scores = fa.transform(data)
from factor_analyzer import FactorAnalyzer
fa = FactorAnalyzer(n_factors=3, rotation='varimax')
fa.fit(data)
factor_scores = fa.transform(data)
Alternatively, scikit-learn's FactorAnalysis class supports Varimax rotation directly since version 0.24, allowing integration after principal component analysis if custom rotation is needed post-decomposition.[34]
MATLAB's Statistics and Machine Learning Toolbox includes Varimax rotation as the default option in the factoran() function for factor analysis, available since releases prior to R2006a.[35] The function estimates loadings and applies rotation via the 'Rotate' name-value pair, defaulting to 'varimax' for orthogonal maximization of squared loading variances; the rotation matrix is output as rotmat.[35] For explicit control, an example is:
matlab
[loadings, spec_var, rotmat] = factoran(data, 3, 'Rotate', 'varimax');
[loadings, spec_var, rotmat] = factoran(data, 3, 'Rotate', 'varimax');
This rotates the estimated loadings matrix while preserving the factor model's communalities.[35]
For custom implementations, NumPy and SciPy can be used to code the iterative Varimax procedure, typically initializing with singular value decomposition (SVD) for the loading matrix and iterating via gradient ascent on the objective until convergence, with checks for singular matrices using np.linalg.cond() or regularization to avoid inversion failures. The statsmodels library offers a ready NumPy-based rotate_factors() function with method='varimax' for such rotations on pre-estimated loadings.
Best practices for Varimax rotation in scripting environments include setting a random seed for reproducibility, such as R's set.seed(123) before fa() or Python's np.random.seed(123) prior to fitting, to ensure consistent results across runs given the iterative optimization.[36] Additionally, validate data suitability for factor analysis beforehand using Bartlett's test of sphericity to confirm significant correlations (p < 0.05), as non-spherical identity matrices invalidate rotation assumptions.