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Acinetobacter

Acinetobacter is a genus of Gram-negative, aerobic, non-fermentative, oxidase-negative coccobacilli bacteria that are ubiquitous in the environment, commonly found in soil, water, sewage, and on human and animal skin. These nonmotile organisms exhibit versatile metabolic capabilities, including the degradation of aromatic compounds, hydrocarbons, and toxins, as well as phosphate solubilization, making some species valuable for bioremediation and plant growth promotion. While the genus encompasses over 80 species with diverse ecological roles as of 2024, certain members, particularly those in the A. baumannii complex such as Acinetobacter baumannii, are opportunistic pathogens that primarily cause nosocomial infections in healthcare settings. Clinically, Acinetobacter species are associated with including , bacteremia, urinary tract , wound , and , predominantly affecting vulnerable populations such as immunocompromised patients, those in intensive care units (ICUs), individuals with prolonged hospital stays, ventilators, catheters, or chronic conditions like and lung disease. These are healthcare-associated, spreading through contaminated surfaces, , or person-to-person via healthcare workers' hands, with A. baumannii being the most frequent culprit and linked to high mortality rates of 30-75% in cases of and up to 70% in resistant strains. The genus's low inherent is offset by its remarkable environmental persistence, surviving dry conditions for over four months on surfaces and forming biofilms that enhance colonization. A major public health concern with Acinetobacter is its propensity for antibiotic resistance, with many strains classified as multidrug-resistant (MDR), extensively drug-resistant (XDR), or even pan-drug-resistant (PDR), driven by mechanisms such as β-lactamases, efflux pumps, and porin alterations. The U.S. Centers for Control and Prevention (CDC) designates carbapenem-resistant Acinetobacter as a "serious" antimicrobial resistance threat, complicating treatment and necessitating strategies like device removal, isolation of colonized patients, rigorous hand hygiene, and targeted antibiotics such as or when susceptible. Beyond pathogenesis, the genus's heterogeneity highlights its ecological significance, with non-pathogenic species contributing to , , and industrial applications, underscoring Acinetobacter's multifaceted role in both human health challenges and environmental processes.

Introduction

Description

_Acinetobacter is a of characterized by their coccobacilli morphology, appearing as short, paired rods or under . These organisms are strictly aerobic, non-motile, and incapable of formation, distinguishing them from many other . They typically stain Gram-negative but may occasionally appear Gram-variable due to challenges in decolorization during staining. Physiologically, Acinetobacter species are catalase-positive and oxidase-negative, enabling their identification in clinical and environmental settings. As strict aerobes, they rely on oxidative for energy production and thrive in oxygen-rich environments without fermentative capabilities. These demonstrate remarkable adaptability, growing across a broad temperature range of 20–45°C, with an optimum around 37°C for most isolates, and they can proliferate on minimal media supplemented with basic nutrients. Biochemically, Acinetobacter exhibits oxidative of glucose, where the sugar is oxidized in the to gluconate before entering central , rather than through . This genus can utilize a diverse array of carbon sources, including and , supporting their survival in nutrient-variable habitats. The cell envelope includes (LPS) in the outer membrane, which provides structural integrity and contributes to barrier functions, alongside porins such as OmpA that facilitate and environmental interactions.

Etymology

The genus name Acinetobacter derives from the Ancient Greek prefix a- (ἀ-, meaning "without" or "non-") and kinētos (κινῆτος, meaning "able to move" or "motile"), combined with the suffix -bakter (from bakterion, βακτήριον, meaning "rod" or "staff"), thus translating to "non-motile rod." This nomenclature directly reflects the defining morphological trait of non-motility observed in these Gram-negative coccobacilli. The name was first proposed in 1954 by French microbiologists Jean Brisou and Augustin R. Prévot in their taxonomic revision of the heterogeneous Achromobacter group, aiming to delineate non-motile, oxidase-negative strains from the motile pseudomonads and related aerobes previously lumped together. Their seminal paper, published in the Annales de l'Institut Pasteur, established Acinetobacter as a distinct genus to accommodate these saprophytic, strictly aerobic bacteria, separating them based on phenotypic characteristics such as lack of motility and oxidase activity. Although initially proposed in 1954, the genus faced taxonomic uncertainty and was not universally accepted until the late 1960s and 1970s, when it was reclassified as a separate entity from Moraxella. In 1968, Peter Baumann and colleagues proposed transferring oxidase-negative, rod-shaped members of Moraxella (previously classified under group II Moraxella) into Acinetobacter based on physiological and biochemical distinctions. This separation was officially acknowledged in 1971 by the Subcommittee on the Taxonomy of Moraxella and Allied Bacteria of the International Committee on Bacteriological Nomenclature, supported by early nucleic acid homology studies. Specifically, pulse-labeled RNA-DNA hybridization experiments in 1970 demonstrated low genetic relatedness between Acinetobacter strains and typical Moraxella or Neisseria species, providing molecular evidence for the genus-level distinction and reinforcing its independence within the emerging family Moraxellaceae.

Taxonomy and Phylogeny

Classification

Acinetobacter is a genus of classified within the family Moraxellaceae, order Moraxellales, class , and phylum . This placement reflects its phylogenetic position among aerobic, non-motile coccobacilli that share metabolic and genetic traits with other members of the Moraxellaceae family, such as Moraxella and Psychrobacter. Species delineation in the genus relies primarily on DNA-DNA hybridization (DDH) thresholds, where values greater than 70% indicate conspecific strains, complemented by 16S rRNA sequence similarities typically exceeding 97% for genus-level assignment. Increasingly, average nucleotide identity () values of 95-96% are used as a genomic proxy for the 70% DDH threshold, facilitating species delineation with whole-genome sequences. Due to limited intraspecies variation in 16S rRNA s, DDH remains the gold standard for resolving closely related taxa, as demonstrated in foundational studies identifying multiple genomic . This polyphasic approach has led to the recognition of over 90 validly named , with ongoing genomic sequencing refining boundaries and identifying additional taxa. Phylogenetic analyses, based on core-genome orthologs and multi-locus sequence data, reveal a monophyletic genus divided into a core group (encompassing genomic species 1–15) and peripheral species. The core group includes clinically significant taxa like A. baumannii (genomic species 2) and forms a tight clade with shared orthologous proteins (approximately 950 families), while peripheral species exhibit greater divergence and adaptation to environmental niches. This structure highlights the genus's ancient diversification, with the core-peripheral split reflecting ecological specialization. One genomic study suggested an ancient origin for the genus, with protein sequence similarities indicating the last common ancestor may date back over 500 million years, comparable to major bacterial radiations.

Key Species

Acinetobacter baumannii is recognized as the primary human pathogen within the genus, classified as genomic species 2 in the Acinetobacter calcoaceticus-A. baumannii complex. Its genome typically measures approximately 4 Mb, enabling a compact structure that supports rapid adaptation in clinical environments. This species exhibits high genomic plasticity, largely driven by the acquisition and mobilization of plasmids that carry resistance genes and virulence factors, facilitating its persistence in hospital settings. Acinetobacter calcoaceticus, an environmental species, is commonly isolated from soil and water sources rather than clinical samples. It is frequently misidentified due to phenotypic similarities with other complex members, complicating accurate surveillance. A distinguishing feature is its ability to utilize acetate as a primary carbon source, reflecting adaptations to nutrient-limited natural habitats. Acinetobacter lwoffii serves as a commensal on and mucous membranes, contributing to the normal without typically causing disease. It is considered less virulent than pathogenic congeners, with infections rare and often linked to immunocompromised states. Differentiation from other species relies on biochemical profiles, including variable utilization of carbon sources and enzymatic activities. Emerging species such as Acinetobacter nosocomialis and are increasingly associated with hospital-acquired infections, forming part of the A. calcoaceticus-A. baumannii complex alongside A. baumannii. These are distinguished genomically through (MLST), which reveals sequence variations in housekeeping genes to resolve species boundaries. Phenotypically, they show subtle differences in growth characteristics and antibiotic susceptibilities compared to A. baumannii.

Biology and Ecology

Habitat

Acinetobacter species are ubiquitous environmental , commonly found in , freshwater, , and various food sources such as and . This wide distribution is attributed to their remarkable tolerance to , limitation, and fluctuating environmental conditions, allowing them to thrive as free-living in diverse ecosystems. In human-associated habitats, Acinetobacter serves as a transient component of the normal and in healthy individuals, with carriage rates typically ranging from 15% to 43%. This colonization is often and reflects the bacterium's adaptability to human skin's relatively dry and nutrient-poor microenvironments. Within environments, Acinetobacter demonstrates exceptional persistence on dry inanimate surfaces, such as bed rails, ventilators, and countertops, surviving for weeks to months—up to four months in some cases—due to its capacity for formation. These biofilms protect cells from and disinfectants, enabling prolonged environmental reservoirs that facilitate . Ecologically, Acinetobacter plays a key role in nutrient cycling processes, particularly in and systems, where it contributes to and mobilization for growth. Certain are also prominent in , degrading hydrocarbons in polluted sites like oil-contaminated soils and sediments, thereby aiding in the restoration of contaminated environments.

Identification

Acinetobacter species are typically identified in the laboratory through a combination of phenotypic and molecular methods, as their morphological similarities to other necessitate targeted approaches for accurate differentiation from clinical or environmental samples. Initial phenotypic characterization involves culturing isolates on selective media such as , where Acinetobacter grows as non-lactose-fermenting, colorless colonies, aiding in preliminary screening from lactose-fermenting . Further biochemical testing using systems like the API 20NE panel () assesses key traits, including negativity, positivity, negativity, and variable citrate utilization, achieving approximately 92% accuracy for genus-level identification when compared to conventional biochemical tests. These methods rely on the bacteria's non-motile, coccobacillary morphology observed via hanging drop preparation and Gram staining. Molecular tools provide higher specificity, particularly for species-level identification within the Acinetobacter calcoaceticus-baumannii (Acb) complex. (PCR) targeting the blaOXA-51-like carbapenemase gene is a rapid and reliable marker for , highly specific for A. baumannii, though rare false positives in other Acinetobacter species have been reported, distinguishing most strains from other species lacking this intrinsic gene. Recent advances as of 2025 include pan-genome-derived specific targets for amplification tests (NATs), enhancing detection accuracy for A. baumannii. (MALDI-TOF MS) enables quick proteomic profiling, with updated databases improving accuracy to over 95% for clinically relevant species like A. baumannii, A. pittii, and A. nosocomialis, though performance may vary for rare or novel taxa. For unresolved cases, sequencing the rpoB gene ( beta subunit) offers robust phylogenetic resolution, achieving 98.2% accuracy in delineating Acb complex species based on variability. Serological and phage typing methods, while historically employed, have limited contemporary use primarily for epidemiological strain tracking in outbreak investigations. Serotyping based on lipopolysaccharide antigens can classify A. baumannii into over 20 serovars, facilitating source attribution in nosocomial settings, but and lack of standardization reduce reliability. , using bacteriophages specific to Acinetobacter, identifies lysis patterns for subtyping, with studies demonstrating utility in correlating strains during hospital epidemics, though it is supplanted by genomic methods due to issues. A major challenge in Acinetobacter identification is misclassification as , stemming from overlapping phenotypic traits like Gram-negative coccobacillary morphology and growth on common media, which automated systems such as VITEK 2 exacerbate through incomplete databases. This error can lead to inappropriate therapeutic decisions, as Acinetobacter exhibits distinct resistance profiles. Resolution often requires confirmatory molecular approaches like rpoB gene sequencing to achieve precise species assignment, underscoring the need for integrated phenotypic-molecular workflows in diagnostic laboratories.

Natural Transformation

Natural transformation in Acinetobacter species enables the uptake and integration of exogenous DNA, contributing to and adaptability. This process is particularly well-characterized in A. baumannii, a clinically significant , where competence is inducible by specific environmental cues such as and calcium ions (Ca²⁺), which enhance DNA uptake frequencies by up to several orders of magnitude compared to basal levels. In contrast, the A. baylyi exhibits constitutive across growth phases, with peak efficiency during late exponential phase, though limitation can further promote DNA uptake as a acquisition strategy. These induction mechanisms allow Acinetobacter cells to respond to host-associated or stressful conditions, facilitating rapid genetic exchange. The DNA uptake machinery in Acinetobacter relies on type IV pili (T4P) for initial binding and translocation of extracellular DNA. T4P, composed of pilin subunits like PilA and accessory proteins such as PilT (retraction ATPase), bind double-stranded DNA at the cell surface, followed by retraction that pulls the DNA toward the periplasm. Once in the periplasm, DNA is processed into single strands by nucleases and translocated across the inner membrane via the ComEC channel, with ComEA acting as a DNA-binding protein to stabilize the process. Integration of the incoming DNA into the genome occurs through RecA-mediated homologous recombination, enabling stable incorporation of genetic elements without the need for plasmids in many cases. This T4P-dependent pathway is conserved across Acinetobacter species and shares components with twitching motility systems, highlighting multifunctional roles in bacterial physiology. Under laboratory conditions optimized for (e.g., addition of and Ca²⁺ in A. baumannii), frequencies can reach up to 10⁻⁴ transformants per recipient , representing a significant proportion of the population capable of DNA uptake. In A. baylyi, frequencies are comparably high, often exceeding 10⁻³ in rich media, underscoring the efficiency of this genus in (HGT). Evolutionarily, promotes HGT of resistance cassettes in Acinetobacter, allowing rapid adaptation to selective pressures such as exposure. For instance, in clinical isolates of A. baumannii, facilitates the acquisition of resistance genes like those encoding carbapenemases, enhancing intraspecies and interspecies in polymicrobial environments. This mechanism contributes to the emergence of multidrug-resistant strains, underscoring its role in pathogenicity and ecological persistence.

Medical and Clinical Aspects

Clinical Significance

_Acinetobacter species, particularly A. baumannii, are opportunistic pathogens primarily responsible for nosocomial infections in healthcare settings. They commonly cause (VAP), accounting for approximately 10–20% of VAP isolates in some (ICU) populations, as well as bacteremia and urinary tract infections (UTIs). These infections often arise from prior colonization rather than primary invasion, with outbreaks frequently reported in ICUs due to the organism's environmental persistence. Patients at highest risk include immunocompromised individuals, such as those with , trauma victims (e.g., from combat injuries), and individuals requiring . Epidemiologically, A. baumannii infections surged in the 2000s, particularly in and , with multihospital outbreaks documented across these regions and beyond. The designated carbapenem-resistant A. baumannii as a critical priority in 2017, highlighting its global threat due to high morbidity and mortality rates, which can reach up to 70% in cases of multidrug-resistant strains. Key virulence factors contribute to A. baumannii's pathogenicity and persistence. The polysaccharide capsule shields the bacterium from complement-mediated killing by the host immune system, while adhesins such as pili facilitate attachment to host cells, biofilm formation, and twitching motility. Efflux pumps enable the extrusion of antimicrobial agents and potentially other toxic compounds, aiding immune evasion and survival in hostile environments.

Treatment

Acinetobacter species, particularly A. baumannii, were historically susceptible to such as imipenem, with minimum inhibitory concentrations (MICs) typically ≤2 µg/mL qualifying as susceptible according to Clinical and Laboratory Standards Institute (CLSI) breakpoints. However, as of the early 2020s, the global prevalence of multidrug-resistant (MDR) A. baumannii isolates is estimated at approximately 80% (range 74-85%), defined as non-susceptibility to at least one agent in three or more antimicrobial categories, complicating effective therapy. Key resistance mechanisms in Acinetobacter include the production of beta-lactamases, such as carbapenem-hydrolyzing class D oxacillinases (e.g., OXA-23) and metallo-beta-lactamases (e.g., NDM-1), which hydrolyze including . resistance often arises from modifying enzymes like aminoglycoside 3'-phosphotransferase (APH(3')) and acetyltransferases (AAC), reducing efficacy of agents like ; susceptibility is assessed via CLSI/EUCAST breakpoints, with amikacin susceptible at ≤16 µg/mL (CLSI). Efflux pumps and porin alterations further contribute to MDR phenotypes, elevating MICs for multiple classes. Current treatment guidelines for -resistant A. baumannii (CRAB) infections, as per the Infectious Diseases Society of America (IDSA) guidance as of July 2024, recommend sulbactam-durlobactam (2 g every 6 hours via 3-hour infusion) combined with a (e.g., imipenem-cilastatin or ) as the preferred regimen for severe infections; supporting trial data showed reduced mortality (19% vs. 32%) compared to colistin-based therapy. For alternatives when sulbactam-durlobactam is unavailable, high-dose ampicillin-sulbactam (9 g sulbactam daily) plus a second agent (e.g., polymyxin B or ) is advised, with emphasized to improve outcomes in MDR cases. (or polymyxin B) and serve as last-resort options, typically in high doses and combinations (e.g., sulbactam plus for CRAB), though MIC breakpoints are ≤2 mg/L for susceptible (EUCAST) and carry risks of . Emerging strategies include trials in the 2020s, which have shown promise in treating refractory MDR A. baumannii infections, such as and bacteremia, through targeted cocktails that lyse resistant strains in preclinical and compassionate-use cases; as of 2025, phase III trials are ongoing. Additionally, sulbactam-durlobactam received FDA approval in May 2023 as a novel inhibitor combination specifically addressing OXA-type enzymes in Acinetobacter.

Infection Prevention

Preventing infections caused by Acinetobacter species, particularly multidrug-resistant strains like carbapenem-resistant Acinetobacter baumannii (CRAB), relies on multifaceted strategies in healthcare settings to interrupt . These measures emphasize standard practices tailored to the organism's environmental persistence and resistance profile. Hand hygiene is a of prevention, including the use of alcohol-based sanitizers, which are effective against Acinetobacter. -based washes can be used for and skin preparation in high-risk settings. Studies have shown that daily chlorhexidine gluconate (CHG) bathing significantly reduces A. baumannii in (ICU) patients, lowering the risk of subsequent infections by up to 50% in high-prevalence settings. Contact precautions, including gown and glove use upon entry to patient rooms, are recommended for colonized or infected individuals to minimize direct and indirect , as per CDC guidelines for multidrug-resistant organisms (MDROs). Environmental cleaning plays a critical role given Acinetobacter's ability to survive on dry surfaces for extended periods. In ICUs, disinfection with ( at 1:10 to 1:100 dilutions) or -based agents effectively eliminates surface contamination, reducing by over 90% in outbreak scenarios. Enhanced protocols, such as daily cleaning of high-touch areas and terminal disinfection with hydrogen peroxide vapor, have been associated with decreased acquisition rates in affected units. Aseptic techniques are essential to prevent device-related entry points for Acinetobacter, which frequently causes catheter-associated urinary tract infections and (VAP). Strict sterile procedures during insertion and maintenance of central venous catheters, urinary catheters, and endotracheal tubes—such as using full-barrier precautions and daily site care—limit bacterial ingress. Implementation of VAP prevention bundles, which include head-of-bed elevation, oral care with , and daily interruption, has been shown to reduce VAP incidence by 40–60% in mechanically ventilated patients, thereby curbing Acinetobacter as a common in these cases. Active surveillance enhances early detection and containment, particularly in high-risk units like ICUs. CDC guidelines recommend screening high-risk patients using rectal swabs (combined with axillary-groin swabs if needed) to identify , which occurs in up to 20–40% of cases and precedes ; this approach, updated in MDRO management strategies as of 2024, facilitates targeted and has reduced in endemic settings by prompting timely interventions.

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