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Lactococcus lactis

Lactococcus lactis is a Gram-positive, spherical coccus-shaped bacterium that belongs to the phylum Firmicutes, class , order Lactobacillales, and family Streptococcaceae, characterized by its non-motile, non-spore-forming, and facultative anaerobic nature. It primarily ferments carbohydrates, such as , into through homolactic fermentation, enabling its essential role in production. With a of approximately 2.3–2.5 million base pairs and a low G+C content of about 35 mol%, it exhibits genetic features that support rapid growth at temperatures between 10–40°C (optimum around 30°C) and the production of bacteriocins like for antimicrobial activity. As a of the industry, L. lactis serves as a primary starter culture in the of cheeses (e.g., Cheddar), yogurts, and other fermented milks, where it drives acidification to lower , enhances texture through exopolysaccharide production, and develops complex flavors via volatile compounds and . Recognized as generally regarded as safe (GRAS) by regulatory bodies like the FDA, it has been used for centuries in and imparts nutritional enhancements, including vitamins such as , , and vitamin K2. The bacterium exists in like l. lactis subsp. lactis and cremoris, with dairy-adapted strains showing erosion and specialized genes for and phage , distinguishing them from plant-origin isolates. Beyond food applications, L. lactis has emerged as a versatile microbial cell factory in due to its well-characterized genetics, plasmid-based systems, and food-grade status, enabling the production of recombinant proteins, therapeutics (e.g., interleukin-10 for ), and vaccines. It also demonstrates potential, surviving gastrointestinal conditions (e.g., 2.5–3 and bile salts), modulating , reducing pathogens through , and offering health benefits like reduction and immunostimulation when consumed at doses of 10⁶–10⁹ viable cells daily. These attributes underscore its transition from a traditional fermentative to a tool in modern industrial and health sciences.

Taxonomy and Classification

Species Description

Lactococcus lactis is a bacterial species classified within the genus Lactococcus in the family Streptococcaceae, order Lactobacillales, class Bacilli, and phylum Bacillota (formerly known as Firmicutes). Originally described as "Bacterium lactis" by Joseph Lister in 1873 based on its role in milk souring, it was reclassified as Streptococcus lactis in the early 20th century. In 1985, Karl-Heinz Schleifer and colleagues proposed the establishment of the genus Lactococcus to accommodate S. lactis and related taxa, distinguishing them from other streptococci through 16S rRNA sequencing, DNA-DNA hybridization, and phenotypic analyses that revealed significant genetic and physiological divergences, such as differences in peptidoglycan composition and fermentation patterns. The species is defined by key morphological and physiological traits that align with its lactic acid bacterial lineage. Lactococcus lactis consists of Gram-positive cocci that are spherical or ovoid in shape, typically arranged in pairs or chains, and measure approximately 0.5 to 1.2 μm in diameter. These are non-motile and non-spore-forming, exhibiting a facultative that allows growth under both aerobic and conditions, with optimal temperatures around 30°C. They are catalase-negative and homofermentative, primarily producing L- from , which underscores their adaptation to nutrient-rich environments like plant material and dairy sources. The type strain for Lactococcus lactis is designated as Lactococcus lactis subsp. lactis NCDO 604, originally isolated from and now maintained as ATCC 19435 in collections worldwide; this serves as the reference for identification and genomic studies.

Subspecies and Strains

As of 2021, Lactococcus lactis is classified into two subspecies: L. lactis subsp. lactis and L. lactis subsp. hordniae. The subspecies L. lactis subsp. lactis is mesophilic with optimal growth around 30°C and is widely employed as a starter in cheese production due to its rapid acidification activity through fermentation to . Within subsp. lactis, citrate-positive variants known as biovar diacetylactis are distinguished by their ability to ferment citrate, leading to the production of , a key responsible for buttery flavors in fermented products. In contrast, the former L. lactis subsp. cremoris—important for flavor enhancement in cheeses like Cheddar through production of compounds such as and —has been elevated to the species level as Lactococcus cremoris sp. nov. The subspecies L. lactis subsp. hordniae, isolated from the plant-hopper Agallia constricta, is less commonly associated with industrial applications. Notable strains include IL1403 and NZ9000, which serve as models in research. The strain IL1403, a plasmid-cured derivative of the industrial isolate IL594, was the first L. lactis to be fully sequenced in , providing a foundational reference for genetic studies with its 2.37 Mb containing genes for and responses. NZ9000, derived from the plasmid-free laboratory strain MG1363 (originally classified as subsp. cremoris, now L. cremoris), is engineered with the nisin-controlled expression () system and functions as a primary host for in biotechnological applications. Strains of L. lactis exhibit significant genetic and phenotypic variations, particularly in content, which influences traits like phage and . Plasmids in dairy-adapted strains, such as those in subsp. lactis, often encode operons (e.g., for β-galactosidase activity) and citrate utilization pathways, enabling efficient milk sugar breakdown. Phage mechanisms, including abortive (Abi) systems like AbiB and AbiD1, are predominantly plasmid-borne and differ among strains; for instance, industrial isolates may carry multiple such plasmids, conferring broad insensitivity to lytic phages that threaten . In industrial applications, strain selection prioritizes rapid acid production rates to ensure timely in fermentations, alongside bacteriophage insensitivity to maintain process reliability. High-performing strains, such as those with optimized acidification (e.g., reaching pH 5.2 in 6 hours in ), are chosen for their balance of these traits, often derived from natural variants with enhanced plasmid-encoded defenses against common phages like those in the 936 or families.

Biology and Physiology

Morphology and Cellular Structure

Lactococcus lactis cells are Gram-positive cocci with a spherical to ovoid shape, typically measuring 0.5 to 1.5 μm in diameter, and they commonly occur as single cells, pairs, or short chains of 2 to 20 cells depending on and conditions. The arrangement in chains arises from incomplete separation during , a feature observed across various s. The cellular envelope features a thick layer characteristic of , which provides mechanical strength and shape maintenance, supplemented by teichoic acids that anchor to the and promote adhesion to surfaces and other cells. These teichoic acids, including lipoteichoic acids linked to the cytoplasmic membrane, constitute a minor component (<1%) but play key roles in cell wall organization and interactions. L. lactis lacks spores for survival under stress, flagella for , and true capsules, though a protective covers the surface in wild-type strains, masking the underlying . Surface proteins, including pili-like structures, are present and enable formation by facilitating cell aggregation and attachment to substrates. Electron microscopy reveals a smooth, featureless surface in wild-type L. lactis cells, with the organized into 25-nm-wide oblique bands beneath the layer, as visualized by on live cells. In mutants lacking surface , the exposed shows a more irregular nanoscale , highlighting the protective role of the outer layer. Transmission electron microscopy of dividing cells occasionally shows invaginations of the cytoplasmic , interpreted as mesosome-like structures involved in septation, while the enzyme is primarily localized in the adjacent to the for efficient pyruvate .

Growth Conditions and Metabolism

Lactococcus lactis is a mesophilic bacterium with an optimal temperature of approximately 30°C, though it can grow over a range of 10–40°C depending on the strain. It thrives at a between 6.0 and 6.9, with initial pH often adjusted to around 7.0 to support robust proliferation before acidification occurs. As a facultative anaerobe, L. lactis prefers microaerophilic conditions for but can shift to fermentative metabolism under strict anaerobiosis or respire when is available in the medium. The metabolism of L. lactis is predominantly homofermentative, converting carbohydrates such as or glucose into through the Embden-Meyerhof-Parnas () pathway. This process yields approximately 90% L(+)- as the primary end product, with minor byproducts like or formed under aerobic or stressed conditions. The high optical purity of L(+)- distinguishes L. lactis from heterofermentative . Key enzymes facilitate lactose catabolism: lactose is transported into the via the lactose-specific phosphotransferase (Lac-PTS), followed by of the phosphorylated form by phospho-β-galactosidase (LacG) to yield glucose-6-phosphate and galactose-6-phosphate, which enters the tagatose-6-phosphate pathway. (Ldh) then reduces pyruvate to L(+)-, regenerating NAD⁺ essential for continued . L. lactis requires specific nutrients for growth, including carbohydrates like or glucose as carbon and energy sources, along with peptides and for protein synthesis. It is auxotrophic for several vitamins, notably and pantothenate, which must be supplied externally due to incomplete biosynthetic pathways. Additionally, L. lactis cannot synthesize and relies on exogenous sources to enable cytochrome-mediated under oxygen exposure. To cope with acidification during growth, L. lactis employs stress responses including acid tolerance via the F₀F₁-ATPase, which pumps protons out of the cell using ATP hydrolysis to maintain intracellular pH homeostasis. Strain variations may influence metabolic efficiency, such as altered lactic acid yields in adapted isolates.

Industrial Applications in Food

Role in Dairy Fermentation

Lactococcus lactis serves as a primary starter culture in the production of various dairy products, particularly cheeses such as Cheddar and Gouda, where it drives rapid acidification of milk through homolactic fermentation of lactose into lactic acid. This process typically lowers the pH from approximately 6.7 to 5.2–5.5 within 4–6 hours at 30°C, promoting the coagulation of milk proteins like casein to form the curd essential for cheese structure. Strains of L. lactis subsp. lactis and subsp. cremoris are commonly employed in mesophilic starters for these semi-hard cheeses, ensuring consistent acid development during the initial manufacturing stages. Beyond acidification, L. lactis contributes to and development via proteolytic activity and production of aroma compounds. The cell-envelope proteinase PrtP hydrolyzes caseins into oligopeptides, which are transported intracellularly and further broken down by peptidases, releasing free that serve as precursors for volatile flavor molecules and enhance . In L. lactis subsp. lactis biovar diacetylactis (also known as subsp. lactis var. diacetylactis), citrate metabolism yields and , key contributors to the buttery and creamy aromas in cheeses and cultured butters. These metabolic pathways, building on the bacterium's basic , support the sensory profile without dominating the overall process. Historically, L. lactis has been integral to since ancient times, with formalized use in 19th-century European cheesemaking through back-slopping of or fermented to propagate natural starters. However, infections have long challenged production by lysing starter cells and causing slow or failed acidification, leading to economic losses; mitigation strategies include rotating phage-resistant strains within multi-strain blends. In modern practices, defined-strain cultures—comprising specific, characterized isolates—are preferred over traditional undefined -based starters for their predictability, reduced phage risk, and scalability in direct-vat inoculation systems.

Use in Other Fermented Foods

Lactococcus lactis plays a role in vegetable fermentations such as sauerkraut and kimchi, often as part of a mixed microbial community that includes Leuconostoc species, where it contributes to acidity development and preservation through lactic acid production and bacteriocin activity like nisin. In sauerkraut production, L. lactis subsp. lactis strains have been isolated from commercial fermentations and used as starters to enhance fermentation consistency and inhibit spoilage organisms. Similarly, in kimchi, L. lactis strains act as starters to extend shelf life by suppressing pathogens such as Lactobacillus plantarum and Pediococcus pentosaceus via antimicrobial compounds. In fermented meat products like and sausages, L. lactis serves as a starter culture, contributing to microbial safety via and acidification, while also generating flavor compounds through lactate accumulation. Additionally, -producing L. lactis transconjugants have been incorporated into sausage fermentation to control growth in the presence of . For beverage fermentations, L. lactis participates in kefir production through symbiotic interactions with yeasts and other lactic acid bacteria, contributing to the acidification and textural properties of the final product. In kefir grains, L. lactis subsp. lactis is among the dominant species that drive the initial stages of milk fermentation, producing lactic acid and exopolysaccharides that influence viscosity. In some traditional beers, such as chicha, L. lactis forms part of the natural bacterial community alongside Lactobacillus and Leuconostoc species, aiding in carbohydrate fermentation during the process. Emerging applications of L. lactis extend to plant-based milk alternatives, where it is employed as a starter for fermenting , soy, and substrates to produce yogurt-like products with improved texture and nutritional profiles. These fermentations leverage L. lactis's ability to metabolize non- carbohydrates, resulting in enhanced capacities and sensory attributes comparable to dairy yogurts. Galactose-positive strains of L. lactis, often derived from nondairy environments, exhibit superior adaptation to these plant-derived sugars, enabling efficient acid production and flavor development in lactose-free media.

Biotechnological and Therapeutic Uses

Probiotic Properties and Health Benefits

_Lactococcus lactis exhibits properties that promote primarily through to the intestinal mucosa and modulation of the . Certain strains produce mucus-binding proteins (MUBs), such as MbpL in L. lactis BGKP1 and Muc in L. lactis TIL448, which facilitate specific binding to glycans in the intestinal layer, enhancing transient colonization and persistence in the . This mechanism supports competitive exclusion of pathogens and contributes to barrier function integrity. Additionally, L. lactis modulates the by producing like , which inhibit the growth of pathogens such as through membrane disruption and pore formation, thereby reducing pathogen colonization without significantly altering commensal populations. The bacterium also demonstrates immunomodulatory effects, particularly through its surface polysaccharides, including exopolysaccharides (EPS). For instance, EPS from L. lactis Z-2 increases the expression of cytokines such as IL-10 and TGF-β in intestinal tissues, promoting and reducing pro-inflammatory responses. Specific strains, like L. lactis T-21 isolated from wild cranberries, exhibit properties; a 2024 randomized, double-blind, placebo-controlled showed that daily intake of 25 mg T-21 improved conditions in individuals with atopic predisposition by reducing trans-epidermal and enhancing skin brightness, indicating broader immunomodulatory benefits. Another strain, L. lactis LB 1022, upregulates IL-10 production in models, suppressing Th2 cytokines (IL-4, IL-5, IL-13) and alleviating allergic symptoms through Treg-mediated immune suppression. Therapeutic potential of L. lactis includes alleviation of allergies via natural IL-10 induction and reduction through bile salt hydrolase (BSH) activity. In atopic dermatitis mouse models, L. lactis LB 1022 reduced IgE levels, infiltration, and release, demonstrating anti-allergic effects independent of genetic modification. For lipid management, strains like L. lactis subsp. lactis exhibit BSH activity that deconjugates bile salts (e.g., 2.47 U/ml with taurocholate), leading to (up to 43.7% by growing cells) and , which lowers intestinal absorption and supports hypocholesterolemic effects. L. lactis holds a (GRAS) status from the FDA, with multiple notices affirming its for use in at levels up to 10^11 CFU per serving, and it lacks known factors due to its non-pathogenic nature and long history in . Human trials confirm high tolerance; for example, a randomized, double-blind administered 1×10^10 CFU/day of L. lactis GCWB1176 for 8 weeks without adverse effects, supporting its profile. For probiotic delivery, L. lactis can be incorporated into fortified yogurts and cheeses, where immobilized cells maintain viability above 6 log CFU/g during refrigerated storage for up to 14 days, ensuring sustained health benefits.

Engineering for Vaccine and Drug Delivery

_Lactococcus lactis has been genetically engineered as a live for mucosal delivery of and therapeutic proteins, leveraging its (GRAS) status and ability to colonize the . A key approach involves the use of nisin-inducible expression systems, such as the pNZ8048 plasmid, which allows controlled production of heterologous proteins like antigens upon addition of the inducer . This incorporates the strong P_nisA promoter and the Usp45 signal to facilitate extracellular of the target protein, enabling high-level expression without the need for selection markers, thus maintaining its food-grade properties. Early demonstrations of L. lactis as a vaccine platform focused on mucosal immunization against tetanus, where recombinant strains expressing the tetanus toxin fragment C (TTFC) induced protective immunity in mice via nasal or oral routes. In a seminal 1997 study, nasal administration of L. lactis secreting TTFC elicited serum IgG and mucosal IgA responses, conferring survival against lethal toxin challenges in 80-100% of immunized mice. More recently, engineering efforts have targeted emerging pathogens, including SARS-CoV-2; preclinical studies from 2022-2024 have shown that oral or intranasal delivery of L. lactis expressing the COVID-19 spike protein or its receptor-binding domain triggers robust humoral and cellular immune responses in mice, including neutralizing antibodies and T-cell activation, positioning it as a needle-free vaccine candidate. Beyond vaccines, L. lactis has been modified for drug delivery in the gut, particularly for treating autoimmune and inflammatory conditions. Strains engineered to secrete proinsulin have demonstrated potential in reversing in mouse models by promoting regulatory T-cell responses and reducing insulitis upon oral administration. Similarly, L. lactis secreting interleukin-10 (IL-10) has shown therapeutic efficacy in murine models, reducing by 50% through local modulation, with a Phase I in Crohn's disease patients confirming safety and feasibility of oral delivery in 2006. In a 2022 study, of the lycopene biosynthesis pathway (via integration of crtEBI genes) enabled L. lactis to produce up to 1.5 mg/L of , an antioxidant that protects intestinal epithelial cells from stress, highlighting its role in targeted delivery. Recent advancements include an early clinical evaluation in 2025, where engineered L. lactis delivering therapeutic agents combined with radiotherapy in three patients with recurrent solid tumors led to tumor reduction and enhanced systemic immunity, demonstrating feasibility in cancer therapy. The advantages of L. lactis for these applications include its food-grade nature, absence of endotoxins (as a Gram-positive bacterium), and in the gastrointestinal , with engineered strains achieving up to 70% through gastric and intestinal phases. However, challenges persist, such as rapid immune clearance by host defenses and limited persistence in the gut, which can reduce delivery efficiency and necessitate protective formulations like . Regulatory progress continues with ongoing preclinical evaluations for oral vaccines and advancing clinical applications in therapeutics as of 2025.

Genomics and Genetic Research

Genome Structure and Sequencing

The genome of Lactococcus lactis consists of a single circular with a size ranging from approximately 2.25 to 2.59 Mb across strains, encoding roughly 2,000 to 2,500 protein-coding genes, and an average G+C content of about 35% https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-3650-5. Strains commonly harbor multiple plasmids, typically 1 to 8 in number and ranging from 2 to over 100 in size, with a lower G+C content of 30-40% compared to the chromosome; these plasmids often carry accessory genes such as the operon (lacABC), which enables metabolism in dairy environments https://academic.oup.com/femsre/article/30/2/243/2367769. The first complete sequence was reported for L. lactis subsp. lactis IL1403 in 2001, revealing a 2,365,589 bp chromosome with 2,311 predicted genes, 86% of which are protein-coding, along with 43 insertion (IS) elements and integrated regions https://www.ncbi.nlm.nih.gov/pmc/articles/PMC311110/. Key genomic features include CRISPR-Cas systems, which provide adaptive immunity against bacteriophages by incorporating spacer sequences from invading viral DNA, a critical defense mechanism in settings where phage infections are common https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6546414/. Mobile genetic elements such as IS elements and transposons are abundant, contributing to genomic plasticity and strain diversity through rearrangements and ; for instance, L. lactis subsp. cremoris genomes often exhibit more pseudogenes and IS elements, suggestive of ongoing genome decay and specialization https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-3650-5. Comparative genomics highlights subspecies-specific adaptations: L. lactis subsp. lactis genomes are generally larger and retain more genes associated with rapid growth and metabolic versatility on diverse substrates, supporting faster acidification in varied environments https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2019.00004/full, whereas subsp. cremoris strains feature specialized clusters for biosynthesis, including enhanced and aminotransferase pathways that generate aroma compounds during https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-3650-5. These differences underscore the evolutionary divergence between plant-associated ancestors and dairy-adapted lineages, with plasmids playing a key role in acquiring traits like utilization unique to subsp. cremoris https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6365430/.

Recent Genetic Modifications and Advances

Since the advent of CRISPR-Cas9 systems in the post-genomic era, targeted in Lactococcus lactis has advanced significantly, enabling precise knockouts and insertions to enhance industrial traits. From 2018 onward, researchers have developed one-plasmid-based CRISPR-Cas9 tools for efficient gene deletion in L. lactis, allowing for the investigation of stress-related pathways without relying on multiple vectors. For instance, CRISPR-associated transposon systems have been adapted for guide RNA-directed insertions, facilitating stable genomic modifications in strains used for . These tools have been applied to improve acid resistance, resulting in strains with significantly higher survival rates under low-pH conditions, as demonstrated in experiments. In , of L. lactis has leveraged modular assembly techniques to construct multi-gene pathways, expanding its role beyond traditional . assembly has been employed to reconstitute complex biosynthetic operons, allowing seamless integration of heterologous genes. Recent efforts have focused on via pathway optimization. These advancements build on core genome features like modular backbones, which facilitate of engineered strains. Omics technologies have further illuminated genetic responses in L. lactis, with studies from 2024 revealing key regulators of . of ccpA mutants under acid and identified over 200 differentially expressed proteins, including those in and envelope remodeling, which enhance survival in fermented environments. Complementing this, metagenomic surveys of fermented foods have mapped L. lactis interactions in microbial consortia, revealing strain-specific adaptations like prophage-encoded resistance genes that dominate in matrices. These insights from -reviewed works underscore how data guide targeted modifications for robust starters. Looking ahead, computational approaches are emerging for L. lactis strain design, integrating multi-omics data to predict resilient variants. In therapeutic contexts, engineered L. lactis has been explored for delivering immunomodulators like IL-10 to address inflammatory conditions such as IBD. These strains, modified with CRISPR for stable expression, continue to show promise in preclinical models. Despite these advances, challenges persist in L. lactis genetic engineering, particularly plasmid instability, where curing rates can reach 50% during prolonged fermentation due to metabolic burden and replication conflicts. Regulatory hurdles for food-grade genetically modified organisms (GMOs) include stringent GRAS assessments, as antibiotic markers and foreign DNA raise containment concerns, limiting commercial deployment. Strategies like auxotrophic complementation and RM system bypassing are mitigating these issues, but integration into chromosomes remains essential for stability.

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