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Isothiocyanate

Isothiocyanates are a class of organosulfur compounds distinguished by the presence of the (–N=C=S), in which a nitrogen atom attached to an (R) forms a cumulative with a carbon-sulfur moiety, yielding the general R–N=C=S. This renders isothiocyanates highly reactive electrophiles, with the central carbon atom serving as the primary site for nucleophilic attack by biological nucleophiles such as thiols and amines. They occur widely in nature as secondary metabolites, particularly in of the order , where they are generated via the myrosinase-catalyzed of glucosinolates upon tissue damage, acting as chemical defenses against herbivores and pathogens. Prominent examples include , responsible for the pungent flavor of and , and , found in . These compounds are not only key contributors to the sensory qualities of like , , and but also exhibit significant bioactivity in human health contexts. Isothiocyanates have been extensively studied for their pharmacological properties, including antimicrobial effects against bacteria such as and , anti-inflammatory mechanisms via modulation of pathways, and chemopreventive potential through induction of phase II detoxification enzymes and in cancer cells. In addition to their natural roles, isothiocyanates find applications in and industry; for instance, phenyl isothiocyanate is employed in the for by selectively reacting with N-terminal amino groups to form phenylthiohydantoin derivatives. Certain derivatives, such as methyl isothiocyanate, serve as soil fumigants and nematicides in due to their biocidal properties. Despite these benefits, some isothiocyanates are toxic at high exposures, causing to , eyes, and respiratory tracts, and they are regulated accordingly in occupational settings. Ongoing research continues to explore their therapeutic potential, particularly in and treatment, leveraging their ability to conjugate with and influence cellular redox balance.

Chemical Fundamentals

Definition and Nomenclature

Isothiocyanates are a class of organosulfur compounds characterized by the –N=C=S, with the general molecular formula R–N=C=S, where R represents an such as an alkyl, aryl, or other group. These compounds are sulfur analogs of isocyanates (R–N=C=O), differing by the replacement of oxygen with , while they are structural isomers of thiocyanates (R–S–C≡N), in which the sulfur atom is singly bonded to the carbon in a linear –S–C≡N arrangement. According to IUPAC , isothiocyanates are systematically named using the "isothiocyanato-" attached to the parent chain, such as alkyl isothiocyanates for simple cases (e.g., methyl isothiocyanate for CH₃–N=C=S) or more complex substitutive names for unsaturated or aromatic derivatives. For instance, phenyl isothiocyanate (C₆H₅–N=C=S) is named isothiocyanatobenzene, reflecting the direct attachment of the to the ring. Historical or common names persist for certain compounds, such as "" for (CH₂=CH–CH₂–N=C=S), which is systematically 3-isothiocyanatoprop-1-ene. The term "isothiocyanate" derives from the prefix "," indicating its isomeric relationship to thiocyanates, highlighting the rearranged connectivity of the –NCS unit where links to the organic group and forms the with carbon. Key examples include benzyl isothiocyanate (C₆H₅CH₂–N=C=S, IUPAC name: isothiocyanatomethyl), often studied for its , and phenethyl isothiocyanate (PEITC, C₆H₅CH₂CH₂–N=C=S, IUPAC name: (2-isothiocyanatoethyl)), a prominent natural derivative.

Molecular Structure and Bonding

The isothiocyanate , -N=C=S, exhibits a nearly linear around the central carbon atom, characteristic of cumulene systems. In representative compounds such as methyl isothiocyanate, crystallographic and analyses reveal bond lengths of approximately 119.6 for the N=C and 157.9 for the C=S , with the C-N measuring 143.9 . These dimensions reflect partial multiple-bond character due to delocalization. In aryl derivatives like phenyl isothiocyanate, the C-N=C bond angle is approximately 165°, deviating from ideality due to conjugation with the aromatic ring, as observed in structures of coordinated . The electronic structure of isothiocyanates arises from cumulene-like involving major contributing forms R–N=C=S ↔ R–N⁺≡C–S⁻, which impart partial double-bond character to the C-N linkage and enhance the of the C=S bond. This delocalization stabilizes the linear N=C=S arrangement and influences the group's reactivity, with the atom bearing partial positive charge in the dominant resonance hybrid. Computational studies at the and CCSD(T) levels confirm these s, showing the N=C intermediate between double and triple (around 2.2-2.5) and the C=S bond order slightly less than double. Isothiocyanates (R-N=C=S) predominate over their (R-S-C≡N) or isomers due to greater thermodynamic , driven by stronger C-N bonds compared to C-S bonds in the alkylated forms. Isomerization from thiocyanates to isothiocyanates occurs under heating or basic conditions, as the energy difference favors the N-linked form by 10-20 kJ/mol in aliphatic cases. Thiocyanate tautomers are rare and typically unstable, appearing only transiently in synthetic pathways. Spectroscopically, isothiocyanates display a characteristic strong absorption band at 2100-2200 cm⁻¹, attributed to the asymmetric of the N=C=S moiety, which is intense due to the change in along the linear axis. In ¹³C NMR spectra, the central carbon resonance appears around 130-140 ppm, often broadened or low-intensity owing to quadrupolar relaxation from the adjacent nitrogen and dynamic averaging of conformers, as exemplified by at approximately 142 ppm. These features aid in structural identification without interference from other functional groups.

Natural Sources

Occurrence in Nature

Isothiocyanates are primarily found in plants belonging to the family, commonly known as , including , , and , where they are released from precursors upon tissue damage such as chewing by herbivores or mechanical injury. These compounds contribute to the pungent flavors characteristic of these plants and serve as natural defenses against herbivores and pathogens by deterring feeding and inhibiting microbial growth. For instance, is a prominent component in and , responsible for their sharp taste and aroma. Similarly, , derived from , is abundant in , while in black mustard seeds yields upon . In food sources, isothiocyanate concentrations vary, with mustard seeds typically containing 400–15,000 mg/kg of , though levels around 100–400 mg/kg are common in processed forms depending on extraction conditions. These quantities highlight their significant presence in dietary staples, where they play a role in plant protection by repelling and suppressing fungal and bacterial pathogens through and disruption of cellular processes. Beyond plants, trace amounts of isothiocyanates occur in other organisms, such as in the defense secretions of insects like larvae, which sequester glucosinolates from host plants to produce these compounds for protection against predators. Certain , including species of , can biosynthesize isothiocyanates naturally, contributing to their ecological roles in microbial communities. Additionally, isothiocyanates exhibit environmental persistence in , originating from the degradation of material, where they influence soil microbial dynamics and provide residual biofumigation effects against pathogens.

Biosynthesis Pathways

In plants, particularly those in the order such as family members, isothiocyanates are primarily biosynthesized through the of precursors by the enzyme (β-thioglucosidase). are sulfur-rich secondary metabolites derived from like , , or . The biosynthesis begins with amino acid chain elongation, where , for example, undergoes transamination to an α-keto acid, followed by condensation with , isomerization, and oxidative decarboxylation to extend the chain by 1-4 methyl groups in most cases, regulated by genes like the MAM family in . Subsequent core structure formation involves conversion of the elongated amino acid to an aldoxime by enzymes (CYP79 family), followed by formation of an S-(hydroxyalkyl)thiohydroximate intermediate via CYP83B1. This intermediate is then glycosylated by UDP-glucosyltransferases to form desulfoglucosinolates and sulfated using by sulfotransferases to yield the final . Upon plant tissue disruption, such as from damage, is released from myrosin cells and hydrolyzes in a reaction that produces isothiocyanates, glucose, and : \text{Glucosinolate} + \text{H}_2\text{O} \xrightarrow{\text{myrosinase}} \text{Isothiocyanate} + \text{D-glucose} + \text{HSO}_4^- This process serves as a defense mechanism, with the unstable aglycone rearranging via a Lossen-like mechanism to form the isothiocyanate. Variations in this pathway occur across species, influencing the specific isothiocyanates produced. In Moringa oleifera, glucomoringin—a glucosinolate derived from phenylalanine—undergoes myrosinase-catalyzed hydrolysis to yield 4-(α-L-rhamnopyranosyloxy)benzyl isothiocyanate, involving side-chain elongation by enzymes like BCAT4/BCAT3 and core formation by CYP79A2/CYP83B1, with the rhamnosyloxy group added during modification. A representative example is sulforaphane, formed from glucoraphanin in broccoli via this pathway, highlighting aliphatic isothiocyanate production. Recent 2024 research on engineered plants has enhanced yields; for instance, overexpression of AOP2 in Arabidopsis thaliana doubled aliphatic glucosinolate levels, increasing potential isothiocyanate output upon hydrolysis, while de novo pathway introduction in Nicotiana benthamiana produced precursors like 4-methylsulfinylbutyl glucosinolate. Beyond , minor isothiocyanate production occurs in through distinct enzymatic mechanisms. In certain bacterial , rhodanese-like enzymes catalyze transfer from or persulfides onto isonitrile precursors, forming isothiocyanates as specialized metabolites, differing from the plant route and contributing to microbial chemical diversity. Insect-specific pathways are less characterized but involve oxidases in defense contexts, where some herbivores adapt by metabolizing plant-derived isothiocyanates rather than .

Synthesis Methods

Laboratory Preparation

One classic laboratory method for preparing isothiocyanates involves the thermal or catalyzed of the corresponding s, where the sulfur atom migrates from the alkyl or to the . For example, heating allyl leads to , as demonstrated in early studies on alkyl derivatives. The general reaction is represented as: \text{R-SCN} \rightarrow \text{R-NCS} This rearrangement typically requires temperatures around 100–200 °C and can be facilitated by Lewis acids like for certain substrates, yielding the isothiocyanate in moderate to good efficiency on a small scale. A widely used route starts from primary amines, which react with carbon disulfide (CS₂) in the presence of a base to form dithiocarbamate salts, followed by desulfurization to afford the isothiocyanate. The initial step proceeds as: \text{RNH}_2 + \text{CS}_2 \rightarrow \text{RNHCS}_2\text{H} Desulfurization can be achieved using reagents such as lead(II) nitrate for aryl derivatives, providing yields of 74% or higher after steam distillation, or tosyl chloride for both alkyl and aryl cases, enabling rapid conversion (<30 min) with yields starting from 34% and purification by column chromatography. A specific example is the preparation of phenyl isothiocyanate from aniline, where aniline reacts with CS₂ to form the dithiocarbamate intermediate, which is then treated with mercury(II) oxide (HgO) for desulfurization: \text{C}_6\text{H}_5\text{NH}_2 + \text{CS}_2 + \text{HgO} \rightarrow \text{C}_6\text{H}_5\text{NCS} This method is effective for bench-scale synthesis and has been employed in classical organic procedures. Recent advances in laboratory preparation emphasize metal-free protocols to enhance and compatibility with sensitive functional groups. Azide-based routes, such as those involving the followed by aza-Wittig with CS₂, provide access to isothiocyanates under mild conditions with yields of 77–92%. Additionally, oxime-derived methods, including reactions of chloroximes with thioureas followed by rearrangement, achieve yields of 71–94%. A 2024 review highlights green variants of these methods, including one-pot processes with high , achieving 80–95% yields for diverse substrates while minimizing waste.

Industrial Production

The primary industrial route for synthesizing involves the reaction of primary amines with (Cl₂C=S) in the presence of a , yielding the desired RNCS product along with HCl as a . This method is favored for its efficiency in large-scale operations, achieving yields of 72% or higher, and is applicable to both aromatic and aliphatic amines. An alternative variant employs in combination with thiols to generate intermediates that form isothiocyanates upon reaction with amines, though remains the dominant reagent due to its direct reactivity. These processes prioritize cost-effectiveness and high throughput, often conducted in continuous flow systems to enhance and . A key example is the production of , a commercially significant compound used in the . It is manufactured either through natural via of mustard seeds ( or Sinapis alba), where the enzyme hydrolyzes glucosinolates to release the isothiocyanate, or synthetically by reacting with followed by thermal rearrangement. The synthetic route predominates for industrial volumes, supporting annual global production on the order of thousands of tons to meet demand for and preservatives. Safety considerations are paramount in these operations, as is highly toxic through , , and dermal contact, necessitating enclosed reactors and stringent protocols. Purification typically occurs via under reduced pressure, exploiting boiling points in the 100–200 °C range for most isothiocyanates, ensuring high purity for commercial applications. Recent developments emphasize , including amine-catalyzed sulfurization of isocyanides with elemental . Additionally, biocatalytic approaches using enzymes have advanced production from precursors in meal, with applications in scalable bioprocessing.

Properties and Reactivity

Physical Properties

Isothiocyanates, particularly those with low molecular weights, typically exist as colorless to pale yellow at room temperature, exhibiting a pungent due to their volatility. For instance, appears as a colorless to pale-yellow oily , while phenyl isothiocyanate is a colorless with a of -21 °C and a of 218 °C. Certain isothiocyanates, such as methyl isothiocyanate (molecular weight 73 g/mol), form colorless low-melting solids with a of 36 °C and a of 117–119 °C, despite its relatively low molecular weight. These compounds demonstrate good solubility in common organic solvents, including , , , and , facilitating their use in various applications. In contrast, their solubility in water is limited; methyl isothiocyanate, for example, dissolves to about 0.76 g/100 mL at 20 °C, while shows solubility around 0.2 g/100 mL. This hydrophobicity, combined with moderate vapor pressures—such as 3.54 mmHg for methyl isothiocyanate at 25 °C—underpins their volatility and characteristic odors, relevant for environmental dispersion modeling. Densities of isothiocyanates generally fall in the range of 1.0–1.1 g/cm³, with specific values like 1.013 g/cm³ for and 1.07 g/cm³ for methyl isothiocyanate at ambient conditions. Refractive indices are typically between 1.5 and 1.53, as exemplified by 1.529 for at 20 °C. Isothiocyanates show a characteristic absorption band at 2100-2200 cm⁻¹ due to the asymmetric stretch of the N=C=S group. Regarding stability, isothiocyanates exhibit thermal stability under dry conditions but can decompose at elevated temperatures; for example, shows significant loss above 80 °C. They undergo slow in moist air, emphasizing the need for careful storage to prevent degradation. The isothiocyanate functional group's contributes to this without inducing reactivity under neutral, anhydrous environments.

Chemical Reactions

Isothiocyanates (RNCS) function as weak electrophiles, with the central carbon of the -N=C=S moiety being the primary site of reactivity due to its electron deficiency. at this carbon is the dominant pathway, as attack at the or atoms is disfavored owing to electronic and steric factors. This electrophilicity arises from the cumulative structure, where the carbon bears a partial positive charge, facilitating interactions with nucleophiles such as , amines, and thiols. Hydrolysis of isothiocyanates occurs slowly under neutral conditions, proceeding via nucleophilic attack by on the central carbon to form an unstable thiocarbamic acid intermediate, which subsequently decomposes to the corresponding primary amine and : \text{RN=C=S} + \text{H}_2\text{O} \rightarrow \text{RNH-C(S)OH} \rightarrow \text{RNH}_2 + \text{COS} The reaction is catalyzed by acids or bases, with accelerating the process through of the , enhancing the electrophilicity of the carbon. For instance, in aqueous , the first-order rate constant for phenyl isothiocyanate hydrolysis is approximately $1.3 \times 10^{-4} s^{-1} at 25°C and 0.5 M HClO_4, though rates at pH 7 are significantly slower, on the order of $10^{-5} to $10^{-4} s^{-1} depending on substituents. Electron-withdrawing groups on the R moiety, such as or cyano, increase the rate by stabilizing the , while electron-donating groups retard it. Isothiocyanates readily undergo with amines and thiols. Reaction with primary or secondary amines yields unsymmetrical thioureas through addition-elimination at the central carbon: \text{RN=C=S} + \text{R'NH}_2 \rightarrow \text{RNH-C(S)-NHR'} These reactions proceed efficiently in polar solvents like or acetone, often at , with high yields. In contrast, reactions with thiols are faster—up to 1000 times more rapid than with amines of comparable nucleophilicity—forming dithiocarbamates: \text{RN=C=S} + \text{R'SH} \rightarrow \text{RNH-C(S)-SR'} This enhanced rate for thiols is attributed to the higher nucleophilicity of sulfur compared to nitrogen, and the equilibrium is reversible under physiological conditions. Beyond simple additions, isothiocyanates participate in cycloaddition reactions, notably [3+2] dipolar cycloadditions that construct five-membered heterocycles. For example, aziridines react with isothiocyanates under Lewis acid catalysis, such as FeCl₃, to form 2-iminothiazolidines via attack of the aziridine nitrogen on the central carbon followed by ring closure involving the sulfur. These transformations are regioselective and complete rapidly, often in minutes at ambient temperature. Similarly, thiiranes undergo metal-free [3+2] cycloadditions with isothiocyanates to yield 1,3-dithiolanes. Reduction of isothiocyanates can selectively yield thioformamides, typically via chemoselective methods that add two electrons and two protons across the C=N bond. Electrochemical reduction achieves this transformation, proceeding through a two-electron to form RNH-CH=S, though chemical reductants like the Schwartz reagent (zirconocene ) provide mild alternatives with full control over the C=S bond integrity. These reductions are valuable for preserving the thioamide functionality without over-reduction to amines. Recent advancements include palladium-catalyzed couplings enabling C-C bond formation. For instance, Pd-catalyzed decarboxylative [3+2] cycloadditions of vinylethylene carbonates with isothiocyanates generate oxazolidine-2-thiones, incorporating a new C-C bond in the process. Such methods highlight the versatility of isothiocyanates in constructing complex carbon frameworks under mild conditions.

Applications

Food and Flavor Chemistry

Isothiocyanates contribute significantly to the sensory profile of foods derived from vegetables, imparting a characteristic pungent, -like taste and aroma. (AITC), predominant in and wasabi, and phenethyl isothiocyanate (PEITC), more prominent in , are key volatile compounds responsible for this sharpness in plants of the order. The human detection for AITC ranges from 0.008 to 0.42 , enabling its potent sensory impact even at low concentrations. These compounds form primarily through enzymatic during . The , compartmentalized in plant cells, activates upon mechanical disruption such as chewing or crushing, converting precursors into isothiocyanates. Heat from cooking inactivates myrosinase, thereby reducing isothiocyanate yield and pungency; for instance, or diminishes levels by up to threefold compared to raw consumption. Recent research from 2023–2025 has explored isothiocyanates for enhancement in functional s, such as incorporating AITC into rice-based products to sensory appeal without overpowering bitterness at optimized doses. Analytical techniques like gas chromatography-mass spectrometry (GC-MS) enable precise profiling of isothiocyanates in food matrices, facilitating and . Additionally, their antibacterial properties support , with natural concentrations of 3–17 in demonstrating inhibition of pathogens like Escherichia coli and Listeria monocytogenes. AITC serves as a synthetic essence replicating mustard flavor in condiments and sauces, offering a stable alternative to natural extracts. In the EU, AITC is authorized as a flavoring with an acceptable daily intake of 0.02 mg/kg body weight and maximum use levels up to 5 mg/kg in foods; in the US, it holds Generally Recognized as Safe (GRAS) status for direct addition as a flavoring agent without specified numerical limits beyond good manufacturing practices.

Biological and Medicinal Uses

Isothiocyanates exhibit significant health benefits, primarily through their properties mediated by activation of the Nrf2 pathway, which upregulates cellular defense against . This mechanism enhances the expression of phase II detoxification enzymes, such as S-transferases and NAD(P)H:quinone oxidoreductase 1, while inhibiting certain phase I enzymes that activate procarcinogens. , a prominent isothiocyanate derived from , exemplifies these effects by potently inducing phase II enzymes and elevating levels to mitigate (ROS) damage. In anticancer applications, isothiocyanates like phenethyl isothiocyanate (PEITC) induce in various cancer cell lines, including and cells, through ROS-dependent signaling and activation of caspases-9 and -3. These actions contribute to tumor growth inhibition without broadly affecting normal cells. Specific applications highlight the therapeutic potential of individual isothiocyanates. (AITC) demonstrates anti-inflammatory effects in preclinical models, including suppression of signaling and reduction of pro-inflammatory cytokines in inflammatory conditions. Moringin, an isothiocyanate from , provides by attenuating and in neurodegenerative models, as evidenced in recent reviews and rat studies showing preserved neuronal integrity post-pretreatment. Additionally, isothiocyanates such as and indole-3-carbinol-derived compounds offer antidiabetic benefits by improving glucose tolerance and reducing , alongside cardioprotective effects through lowered and enhanced endothelial function. As of 2025, supplements are in phase II clinical trials for autism spectrum disorder, demonstrating improvements in social responsiveness and behavioral symptoms in randomized controlled studies. For , phase II trials of in former smokers have shown reduced proliferative markers like Ki-67 in bronchial biopsies, supporting its role in chemoprevention. However, high doses pose risks; for instance, methyl isothiocyanate has an oral LD50 of approximately 175 mg/kg in rats, leading to gastrointestinal irritation and systemic effects. Key mechanisms underlying these benefits include (HDAC) inhibition, which promotes and favoring and , as seen with PEITC and benzyl isothiocyanate targeting and HDAC3. Isothiocyanates also scavenge ROS directly and indirectly via Nrf2, balancing intracellular . remains a challenge due to poor aqueous solubility, but liposomal formulations of PEITC enhance gastrointestinal absorption and systemic delivery, improving therapeutic efficacy in preclinical models.

Coordination and Materials Science

Isothiocyanates (RNCS) serve as ambidentate ligands in coordination chemistry, capable of binding to metal centers through either the nitrogen or sulfur atom, similar to their inorganic analog thiocyanate (SCN⁻), though the latter is more commonly employed. In mononuclear complexes, organic isothiocyanates form stable structures analogous to octahedral [M(NCS)₆]⁴⁻ species, where coordination typically occurs via the nitrogen lone pair, as observed in transition metal complexes like those of copper(II) with L-arginine and isothiocyanate ions. For instance, organotin(IV) isothiocyanates, such as Ph₂Sn(NCS)₂, exhibit trigonal-bipyramidal geometries with N-bound ligands, demonstrating the versatility of RNCS in forming five-coordinate species. In coordination polymers, isothiocyanates act as bridging linkers, enabling the construction of extended frameworks with potential catalytic applications. Phenyl isothiocyanate (PhNCS), for example, participates in reactions with N-heterocyclic carbene-supported nickel complexes to form nickelacycles, which can facilitate insertions of E-H bonds (E = C, N, P, S) into heterocumulenes, highlighting its role in catalytic processes. Although specific Pd or Rh systems with PhNCS for catalysis are less documented, related thiocyanate-based polymers with palladium have shown promise in cross-coupling reactions, suggesting analogous utility for RNCS derivatives. Recent efforts have explored luminescent metal-organic frameworks (MOFs) incorporating isothiocyanate linkers, where the -N=C=S group contributes to tunable emission properties through metal-ligand charge transfer, as seen in cadmium-based MOFs with aminopyridine and isothiocyanate ligands that exhibit fluorescence suitable for sensing applications. Beyond coordination compounds, isothiocyanates find applications in as precursors for advanced carbon-based materials. Pyrolysis of isothiocyanate-containing ionic liquids, such as 1-ethyl-3-methylimidazolium (Emim-SCN), yields nitrogen-sulfur co-doped porous carbons with tunable content (up to 10 at% S and 15 at% N), enhancing electrocatalytic performance in oxygen reduction reactions due to improved density. These materials exhibit high surface areas (over 1000 m²/g) and are synthesized in a one-pot process, making them viable for devices. Additionally, isothiocyanate-functionalized thin films, often in dot hybrids, enable sensitive detection of nucleophiles like amines through intramolecular charge transfer mechanisms, with detection limits as low as 0.1 μM for , leveraging the electrophilic central carbon for selective reactivity. In materials, methyl isothiocyanate (MITC) remains a key soil fumigant, volatilizing to penetrate soil pores and suppress pathogens, nematodes, and weeds. Studies from 2022–2023 have shown that post-application practices like tarping can extend its persistence up to 168 hours while aiding emission control. MITC, generated from metam sodium, is subject to regulatory monitoring in for environmental risks, including groundwater protection, with ongoing shifts toward alternatives like biofumigation in some practices. The bonding in isothiocyanate ligands involves σ-donation primarily from the lone pair to the metal, complemented by π-acceptance through the cumulene π* orbitals, which stabilizes low-valent metals and influences properties. Upon coordination, the spectrum shows a characteristic shift in the ν(CNS) stretching frequency to 2050–2100 cm⁻¹ for N-bound modes, distinguishing them from S-bound (around 780–860 cm⁻¹) and free ligand vibrations (2100–2140 cm⁻¹), as confirmed in complexes like isothiocyanates with pyrazines. This spectroscopic marker aids in determining modes and has been pivotal in structural analyses of thiocyanato and isothiocyanato derivatives.

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