Fact-checked by Grok 2 weeks ago

Selective breeding


Selective breeding, also termed artificial selection, is the process by which humans deliberately mate or exhibiting desired heritable traits to produce offspring that more consistently display and enhance those characteristics across generations, thereby accelerating genetic changes aligned with human objectives such as improved yield, size, or utility. This method contrasts with by substituting human choice for environmental pressures, enabling rapid adaptation of domesticated species to agricultural, industrial, or companion roles.
Practiced since approximately 9000 BCE, selective breeding underpinned the of staple crops like and , as well as such as and , transforming wild progenitors into highly productive forms that supported human and . In , it has yielded diverse varieties, from high-yield kernels vastly larger than teosinte ancestors to multicolored carrots bred for nutritional content and . For animals, it produced the morphological diversity among dog breeds, from diminutive Chihuahuas to massive Great Danes, alongside enhanced traits like milk production in or rapid growth in broiler chickens. These advancements have dramatically boosted global , with selective breeding contributing to exponential increases in crop and productivity over millennia. Despite its successes, selective breeding carries risks, including narrowed from intense focus on few traits, which can amplify deleterious recessive alleles and heighten vulnerability to diseases or environmental stresses, as observed in inbred lines prone to declines and skeletal disorders. In companion animals , prioritizing extreme conformations—such as flattened faces in brachycephalic breeds—has led to chronic health issues including respiratory distress, , and reduced lifespan, prompting debates on welfare standards in breeding practices. Modern genomic tools now complement traditional selection to mitigate these pitfalls, enabling precise trait enhancement while preserving broader genetic health.

Fundamentals

Definition and Core Principles


Selective breeding, also known as artificial selection, is the process by which humans intentionally select organisms possessing desirable traits for reproduction, thereby increasing the frequency and expression of those traits in subsequent generations. This human-directed method contrasts with , as it substitutes deliberate choice for environmental pressures in determining which individuals contribute genes to the next generation.
The core principles of selective breeding rest on three foundational elements derived from : , , and differential . provides the raw material, arising from mutations, recombination, and , ensuring a range of phenotypic differences within a upon which selection can operate. quantifies the proportion of phenotypic variance attributable to genetic variance transmissible to offspring, typically estimated as h^2 = \frac{V_G}{V_P}, where V_G is genetic variance and V_P is total phenotypic variance; traits with higher respond more predictably to selection. Differential , imposed by selection, favors individuals with superior values, generating a selection differential that translates into genetic gain over generations via the breeder's : R = h^2 S, with R as response to selection and S as selection differential. These principles enable cumulative improvement but are constrained by genetic limits, such as or , where selection for one trait may inadvertently alter others. from long-term breeding programs, such as those in yielding annual genetic gains of 1-5% in traits like milk yield, validates the efficacy of these mechanisms when applied systematically.

Underlying Genetic Mechanisms

Selective breeding achieves genetic improvement by exploiting heritable variation in traits, where phenotypes emerge from interactions between genotypes and environments, with enabling predictable across generations. The foundational mechanism involves differential reproduction of individuals carrying that contribute favorably to selected traits, thereby shifting population frequencies toward those enhancing the target . This process parallels but is directed by human choice, amplifying additive effects at quantitative trait loci (QTL) or numerous small-effect polymorphisms underlying polygenic traits common in breeding programs. Narrow-sense heritability (h²), defined as the ratio of additive genetic variance (V_A) to total phenotypic variance (V_P), quantifies the proportion of variation transmissible via additive allelic effects and directly predicts the response to selection via the breeder's equation: R = h² S, where R represents the generational change in mean value and S is the selection differential (the difference between the population mean and the mean of selected parents). Estimates of h², derived from methods like parent-offspring regression or genomic relatedness matrices, typically range from 0.1 to 0.5 for agriculturally important such as growth rate or , indicating moderate predictability of outcomes despite environmental influences and non-additive effects like dominance or that contribute to broader genetic variance but less reliably to long-term gain. Genetic variation sustaining selection arises primarily from standing allelic diversity maintained by segregation and recombination during , with rare mutations providing novel inputs over longer timescales; however, intense in closed breeding populations can erode this variation through fixation of favorable alleles or increase , potentially leading to reduced and diminished response after initial gains. Quantitative genetic models account for these dynamics by partitioning variance components, enabling breeders to sustain progress through strategies like maintaining diverse or incorporating genomic selection to capture cryptic variation at causal loci. itself is context-dependent, varying with environmental uniformity and population structure, underscoring that empirical estimation in target conditions is essential for accurate forecasting of genetic gain.

Historical Development

Prehistoric and Ancient Practices

The earliest evidence of selective breeding appears in the period, approximately 12,000 years ago, coinciding with the of and in the and other regions as humans shifted toward sedentary . This process initially involved unconscious selection, where individuals with traits favoring human use—such as reduced in or docility in —were preferentially propagated, gradually altering genetic profiles over generations. Archaeological and genetic data indicate that these practices marked the onset of artificial selection, distinct from natural processes, as humans actively influenced reproduction to enhance utility for food, labor, and companionship. Among animals, dogs represent one of the earliest cases, domesticated from gray wolves (Canis lupus) between 17,000 and 13,000 years before present in , with selection favoring traits like reduced aggression and enhanced hunting or sentry capabilities. In the , sheep domestication began around 12,000 BP, goats around 11,000 BP in southeastern Anatolia and the , cattle between 11,000 and 10,500 BP from in similar locales, and pigs around 10,500 BP, all through selection for herding suitability, meat yield, and milk production, evidenced by morphological changes like smaller body sizes and curved horns in remains. Cattle domestication specifically originated in the mid-9th millennium BC in Southwest , involving a genetic bottleneck from an estimated 81 female founders, with subsequent selection reducing diversity as populations spread to by 6400 BCE. For plants, selective breeding is documented in the transformation of teosinte grass into around 10,000 years ago in , where early farmers chose variants with larger, non-shattering ears for easier harvesting and higher yields, as confirmed by archaeological cobs from sites like Guilá Naquitz Cave. In the Near East, wild and underwent rapid by 9500 BCE, with selection against seed shattering—favoring "sticky" mutants that retained grains—evident in archaeological assemblages showing increased non-dehiscent forms within centuries. These changes, driven by repeated of favored phenotypes, demonstrate early human intervention yielding domesticated species adapted to , distinct from wild progenitors. In ancient civilizations, selective breeding practices grew more systematic, incorporating deliberate hybridization and trait-specific mating. In around 2500 BCE, the kunga—elite hybrid equids used for warfare and transport—were produced by crossing female domestic donkeys with male hemiones (wild Asiatic asses), representing the earliest archaeogenetically confirmed human-engineered animal hybrids. Egyptian records from the New Kingdom (1550–1070 BCE) describe royal breeding programs for suited to warfare, selecting for speed and adaptation to the environment amid imports from the . Similarly, third-millennium BC Iberian sites yield DNA evidence of managed sheep flocks with genetic signatures of selection for and , indicating organized herding beyond mere capture. These examples reflect advancing causal understanding of , prioritizing empirical outcomes like productivity over wild variability.

Enlightenment to Industrial Era Advancements

During the 18th century, as part of the , selective breeding evolved into a more deliberate and systematic practice, driven by the need to boost productivity to support growing urban populations and industrial demands. English agriculturist Robert Bakewell (1725–1795) led this shift by applying controlled mating and to enhance specific traits in sheep, , and horses on his Dishley estate. For Leicester Longwool sheep, Bakewell selected rams and ewes for faster weight gain, finer bones, and superior carcass quality, resulting in animals that reached marketable weight in under a year—compared to longer times in unimproved breeds—and produced mutton with higher fat content prized by markets. His progeny testing, where potential sires were evaluated over multiple seasons before breeding, minimized variability and amplified , with records showing his improved sheep fetching premiums up to three times those of common stock by the 1770s. Bakewell's methods extended to Dishley Longhorn cattle, selected for lean meat yield and milking ability, and New Leicester horses for draft power, spreading via leased rams that disseminated elite genetics across and influencing . By the late 1700s, contemporaries like Thomas Coke of implemented similar progeny-based selection on Norfolk Horn sheep and Southdown breeds, achieving documented yield increases of 20-30% in wool and meat through targeted crossing and culling of inferiors. These practices correlated with broader agricultural output gains, as enclosure acts consolidated land for specialized farming, enabling data-driven herd management that foreshadowed quantitative genetics. In the , amid industrialization's demand for standardized breeds, herd books and societies formalized selective breeding, emphasizing purity and measurable traits. The Colling brothers in developed from 1780 onward by crossing local stock with Bakewell-influenced sires, selecting for dual-purpose milk (up to 10 gallons daily in top cows) and beef conformation, with the first herd book published in 1822 tracking over 1,000 animals by descent. Sheep breeding advanced similarly, with imports from selectively crossed for fine suited to mills, as in and programs yielding fleece weights doubling pre-1800 averages by mid-century. , though less individualized, saw empirical selection for yield in root crops like turnips and cereals under four-field rotations, with farmers propagating high-tillering varieties that supported 20-50% productivity rises in enclosed fields. These advancements rested on observational rather than genetic , yet yielded verifiable economic impacts: British output rose approximately 150% from 1700 to 1850, underpinning from 5.5 million to 21 million. Central European breeders, such as those in , refined Bakewell's techniques for wool sheep, prioritizing genealogical records to sustain improvements amid variable climates. Limitations persisted, including noted in some closed herds, prompting hybrid vigor experiments by the 1840s.

Modern Scientific and Genomic Era

The integration of Mendelian genetics into selective breeding practices accelerated following the independent rediscovery of Gregor Mendel's laws of in 1900 by , , and , which established the particulate nature of genetic transmission and refuted earlier blending models prevalent in breeding theory. This foundational shift enabled breeders to predict patterns for traits, laying the groundwork for systematic programs in crops and . Concurrently, the emergence of in the early 20th century, pioneered by in his 1918 paper partitioning phenotypic variance into additive, dominance, and epistatic components, provided mathematical frameworks to model polygenic traits central to most breeding objectives. Sewall Wright's path analysis and J.B.S. Haldane's statistical contributions further refined estimates of and response to selection, formalized as R = h^2 S (where R is the response, h^2 is narrow-sense , and S is the selection differential), allowing for optimized phenotypic selection in populations with continuous variation. Advances in from the mid-20th century onward transformed selective breeding by enabling indirect selection via genetic markers. The 1953 elucidation of DNA's double-helix structure by and facilitated the development of DNA-based tools, culminating in the first use of restriction fragment length polymorphisms (RFLPs) as markers in the . (MAS), which links molecular markers to quantitative trait loci (QTLs) for early or indirect trait selection, gained traction in the after initial applications with isozymes in the for introgressing traits like disease resistance in tomatoes. MAS improved selection efficiency for traits difficult or costly to measure phenotypically, such as yield components in or milk production in , though limited by marker density and decay. By the late , single nucleotide polymorphisms (SNPs) replaced earlier markers, enhancing resolution in QTL mapping and breeding programs across species. The genomic era, marked by dense marker arrays and computational models, represented a with the proposal of genomic selection (GS) by Theo Meuwissen, Ben Hayes, and Mike Goddard in their 2001 paper, which demonstrated that genome-wide data could predict total genetic values with accuracies rivaling or exceeding pedigree-based methods. GS estimates breeding values using statistical models like genomic best linear unbiased (GBLUP), capturing both major and minor effect loci without prior QTL identification, thereby accelerating genetic gain by enabling selection on juveniles before phenotypic expression. In , the U.S. Department of Agriculture released the first official genomic evaluations in January 2009 for Holsteins and Jerseys, followed by other breeds, resulting in generation intervals shortening from 4.6 to 2.5 years and genetic gain rates increasing by up to 50% for traits like fat yield. adopted GS similarly, with applications in and reducing cycle times from 10-12 years to under 5 years in some programs, as denser via next-generation sequencing lowered costs from thousands to under $10 per sample by the . These tools have unified animal and methodologies, prioritizing empirical genomic data over sole reliance on phenotypes, though challenges persist in maintaining and model accuracy across environments.

Applications

In Animal Breeding

Selective breeding in entails the systematic selection of individuals exhibiting superior heritable traits for , resulting in populations with amplified characteristics such as enhanced rates, , and adaptability to human needs. This process, applied across terrestrial , species, and , has yielded substantial genetic gains, though it also introduces risks like reduced and associated health vulnerabilities. In , breeding programs have focused on economic traits, with documented annual genetic improvements in milk yield for exceeding 1% since the mid-20th century, accelerating further after bovine sequencing in the early enabled . Similar advances in have increased carcass weight and feed efficiency through targeted selection initiated in the 1700s by figures like Robert Bakewell, who emphasized and progeny testing for traits like meat quality. Pigs have seen a 50% rise in litter size and 37% increase in lean meat yield from the 1960s to 2005 via selective breeding, alongside improvements in sheep for wool production and lamb growth. However, intense selection for production often correlates with , including higher incidences of genetic defects and fertility declines in breeds like fast-growing broilers and dairy cows.

Terrestrial Livestock

Terrestrial breeding exemplifies selective breeding's role in agricultural intensification. In , programs have boosted annual milk production per cow from approximately 5,000 pounds in the to over 23,000 pounds by 2020 in the U.S., driven by selection indices incorporating traits like fat and protein content alongside health metrics. selection has enlarged mature body size and marbling, with breeds showing marked improvements in final product quality since the through within-breed and crossing. breeding has prioritized rapid growth and feed conversion, yielding annual genetic gains of 2-3% in average daily gain, though this has elevated risks of skeletal issues and reduced longevity. Sheep programs target dual-purpose traits, enhancing fleece weight by up to 5% per generation while mitigating through diverse sire lines.

Companion and Working Animals

Companion and working animals demonstrate selective breeding's customization for behavioral and morphological traits. , descended from wolves through initial around 15,000–40,000 years ago, underwent intensified artificial selection post-agriculture to produce over 400 breeds differentiated by function, such as herding in Border Collies or retrieval in Retrievers. This has fixed extreme phenotypes—like in Pugs—but at the cost of health compromises, including respiratory distress and prevalent in 20-50% of certain purebreds due to reduced . Working equines, including Thoroughbreds for , trace speed enhancements to 18th-century foundational sires, achieving average race times reduced by 10-15% over two centuries via pedigree-based selection. exhibit less breed diversification, with selective efforts mainly amplifying coat patterns and temperament since the , yielding fewer genetic bottlenecks than in .

Aquaculture Species

Aquaculture selective breeding, formalized in the 1970s, targets farmed fish and for traits like and resistance amid expanding global production. programs in have delivered 10-12% annual genetic gains in harvest weight since inception, with 12 generations yielding doubled rates and halved feed conversion ratios through family-based selection. Similar efforts in and emphasize pathogen resistance, reducing mortality from by up to 50% in selected lines via genomic tools. These advances project potential production doublings within a decade if scaled, though challenges persist in maintaining effective population sizes to avert , which can erode gains in later generations.

Terrestrial Livestock

Selective breeding in terrestrial livestock has focused on enhancing traits such as milk yield, meat production, growth rate, litter size, and resistance in species including , sheep, goats, and pigs. These efforts, rooted in artificial selection of desirable phenotypes across generations, have driven substantial genetic gains, often quantified through estimated breeding values and estimates for key production traits. For instance, in , selective breeding has prioritized high milk volume and fat content, leading to average annual genetic progress of approximately 100-150 kg in milk yield per since the mid-20th century. In breeds like Holsteins, which dominate global production, selective breeding since 1960 has nearly tripled milk output per cow, from around 5,000 kg to over 14,000 kg annually in high-yielding herds, attributed to genetic selection accounting for about 50% of total productivity gains when combined with improved and . breeding programs have similarly targeted carcass weight, feed efficiency, and marbling, with breeds such as achieving genetic gains of 10-20 kg in yearling weight per decade through selection indices incorporating ultrasound-measured traits. Swine breeding has yielded marked improvements in reproductive and carcass traits; from the to 2005, selective breeding increased litter sizes by 50% (from roughly 8 to 12 piglets) and lean meat percentage by 37%, reducing backfat while enhancing growth rates to market weight in under 150 days. Sheep and goat breeding emphasizes dual-purpose outcomes, including wool yield, lamb growth, and kidding rates; in meat-focused sheep lines, genetic selection has boosted weaning weights by 1-2 per generation and carcass lean yield, though rapid growth selection has occasionally correlated with higher dystocia rates. Goats, often bred for milk or mohair, have seen heritability-driven gains in daily milk production of 0.2-0.3 via progeny testing, with crossbreeding strategies further amplifying hybrid vigor for meat traits. These advancements rely on quantitative genetic principles, where narrow-sense (typically 0.1-0.4 for production traits) guides selection intensity, enabling annual genetic progress of 1-3% in targeted metrics across populations. Modern integrations of genomic selection have accelerated gains by 20-50% over traditional methods, reducing intervals through early-accuracy predictions. However, intensive selection for has prompted balanced indices incorporating and to mitigate correlated declines, such as reduced reproductive efficiency in high-milk lines.

Companion and Working Animals

Selective breeding has transformed wolves into over 300 recognized dog breeds, with lineages diverging for companionship and work since domestication approximately 20,000 to 40,000 years ago. Early selection emphasized functional traits like herding instinct in breeds such as Border Collies, where genetic markers for high intelligence and eye-stalking behavior have been intensified through generations of targeted matings. Similarly, hunting breeds like Pointers were developed by 17th-century English breeders to exhibit strong pointing posture and scent-tracking ability, enhancing efficiency in retrieving game. For working roles beyond dogs, have undergone selective breeding since for traits like in Arabians, documented in breeding records from the 7th century onward, and draft power in Clydesdales, where muscle mass and calm temperament were prioritized in 18th-century . These efforts rely on of polygenic traits, such as stamina linked to variations, allowing populations to outperform wild ancestors in human-directed tasks. Companion animals, particularly and , have been bred for aesthetic and docile traits, often converging on juvenile features like shortened muzzles in pugs and , a pattern confirmed by genomic analysis showing parallel selection pressures since the . standards, established by organizations like the in 1884, guide breeders to emphasize conformation over utility, resulting in breeds like Chihuahuas selected for diminutive size under 6 pounds. However, closed pedigrees foster coefficients exceeding 25% in some lines, correlating with reduced —e.g., a 2021 study found Golden Retrievers with high runs of homozygosity exhibited 15-20% lower litter sizes. Intense selection in working breeds maintains utility but introduces vulnerabilities; for instance, dogs show elevated risks of from conformational extremes, with prevalence up to 20% in German Shepherds per orthopedic registries. Responsible practices, advocated since the by veterinary bodies, incorporate genomic testing to mitigate , preserving traits like guarding vigilance in breeds such as Rottweilers while reducing congenital defects. Overall, these programs demonstrate causal links between human-directed selection and amplified phenotypic extremes, balanced against empirical evidence of welfare trade-offs from diminished .

Aquaculture Species

Selective breeding in aquaculture targets commercially important species of fish, crustaceans, and mollusks to improve traits such as growth rate, survival, disease resistance, and feed conversion efficiency, enabling higher production yields and . Family-based selection programs, often spanning multiple generations, have demonstrated genetic gains of 10-15% per generation for growth in many , surpassing traditional farming practices reliant on wild stocks. These programs leverage to select superior breeding families, with heritability estimates for growth traits typically ranging from 0.2 to 0.4, allowing predictable progress despite challenges like mass spawning and high fecundity in aquatic organisms. Atlantic salmon (Salmo salar) exemplifies successful application, with Norwegian programs established in the 1970s yielding cumulative gains where modern strains exhibit 3-4 times faster growth than wild progenitors after 10-12 generations of selection. has improved by approximately 30% relative to base populations, reducing resource inputs for equivalent output and contributing to Norway's annual production exceeding 1.5 million tonnes by 2023. Disease resistance to pathogens like sea lice and infectious salmon anemia has also advanced through multi-trait selection, lowering mortality rates and use in net-pen farming. In ( niloticus), the Genetically Improved Farmed (GIFT) strain, developed via selective breeding since the , achieves 10-17% per-generation increases in body weight, enhancing yields in pond and cage systems across and . (Litopenaeus vannamei) breeding programs, such as those originating in in 1997 and expanded commercially, focus on resistance to virus and Taura syndrome, with growth gains of 10-20% per generation improving survival from 20-30% in unselected stocks to over 70% in advanced lines. For mollusks like Pacific oysters ( gigas), selection for faster shell growth and meat yield has boosted harvest indices by 15-20% per generation, supporting sustainable bivalve amid environmental pressures. Overall, these efforts underscore selective breeding's role in scaling global output, projected to double by 2050 with intensified genetic programs, though realization depends on integrating genomic tools for polygenic traits.

In Plant Breeding

Selective breeding in entails the deliberate of individuals exhibiting favorable traits, such as enhanced , uniformity, or to environmental stresses, to propagate those characteristics in subsequent generations. This process, initiated during the approximately 10,000 years ago, fundamentally altered wild species into domesticated crops by favoring like non-shattering seed pods in cereals, which prevented natural dispersal and facilitated human harvesting. Evidence from archaeological and genetic studies confirms that such selections reduced in domesticated lineages while amplifying adaptive traits absent or rare in wild ancestors. A prominent example is the domestication of from teosinte, a wild Mexican grass, where over 9,000 years of selection increased kernel size and cob development, yielding plants with up to 1,000 kernels per ear compared to teosinte's few scattered grains. Similarly, wild cabbage underwent selective breeding to produce diverse vegetables including , , and , demonstrating how artificial selection can derive multiple morphologies from a single progenitor through targeted trait enhancement. In modern agriculture, selective breeding has driven substantial productivity gains, contributing roughly 50% of observed improvements in crop output through yield-enhancing varieties and better resource utilization. For , breeding efforts during the mid-20th century incorporated semi-dwarfing genes and disease resistance, elevating global yields from under 1 metric ton per hectare in the 1950s to averages exceeding 3 metric tons per hectare by the 2000s in major producing regions. Rice breeding programs have similarly realized genetic gains of 1-2% annually, underpinning for billions. These advancements underscore selective breeding's causal role in amplifying and allocation, though they often necessitate complementary agronomic practices for full realization. Applications extend to non-food plants, where selection has optimized fiber production in —doubling lint yields since the 1900s—and ornamental traits in flowers like roses, achieving novel colors and forms through hybridization. Empirical data from long-term trials indicate that while narrows genetic bases in elite lines, strategic incorporation of wild mitigates risks of vulnerability to pests or climate shifts. Overall, selective 's efficacy in derives from their reproductive plasticity, including and , enabling rapid fixation of desired alleles across populations.

Crops for Food and Fiber

Selective breeding has profoundly shaped food and by enhancing traits such as , uniformity, and environmental adaptability through deliberate human selection over millennia. In food crops, ancient began with cereals like , transformed from the wild teosinte grass with small, hard s to modern varieties producing large, edible kernels, a process initiated around 9,000 years ago in . Similar selection in and prioritized non-shattering heads and larger grains, enabling reliable harvests and supporting early agricultural societies. The 20th-century accelerated these gains via targeted breeding for semi-dwarf varieties that resisted under high inputs, dramatically boosting . yields in developing countries rose 208%, 109%, and 157% from 1960 to 2000, averting widespread amid . In the U.S. , yields tripled since 1950 through breeding for hybrid vigor and disease resistance, maintaining water inputs while expanding output. These advancements relied on empirical selection of heritable traits, yielding staple crops that supply the majority of global caloric needs. For fiber crops, selective breeding focused on fiber length, strength, and yield. Cotton domestication in regions like the Indus Valley and , dating back over 5,000 years, involved selecting for longer, more abundant lint fibers from wild species, culminating in modern upland cotton varieties with fibers up to 1.5 inches long. , cultivated for linen since the period in the , underwent artificial selection for taller stems and finer fibers, as seen in Russian landraces bred for height exceeding 1 meter to maximize fiber extraction. These efforts improved processing efficiency and quality, underpinning industries from ancient to contemporary apparel.

Ornamental and Industrial Plants

Selective breeding of ornamental has primarily targeted aesthetic and functional traits, including flower color, shape, size, fragrance, architecture, and post-harvest longevity, to meet demands for , , and interior . In , systematic collection, , and breeding of ornamentals intensified from the 17th to 18th centuries, building on earlier ancient practices and leading to thousands of cultivars across like ( spp.), ( spp.), and orchids (Orchidaceae). For instance, sweet alyssum (), originally a wild Mediterranean , has been selectively bred to produce a of flower colors, including and variants, enhancing its appeal in . These efforts have resulted in over 30,000 registered cultivars by the early 21st century, achieved through cross-pollination and selection for traits like repeat blooming and disease resistance. In industrial plants, selective breeding emphasizes yield and quality of non-food products such as , resins, fibers, and bioactive compounds, often prioritizing economic viability over edibility. The para rubber tree (), native to and widely planted in since the late , exemplifies this: decades of from high-yielding seedlings increased annual productivity from approximately 650 kg per in unselected populations to over 2,000 kg per in modern elite clones by the mid-20th century. Similarly, guayule (), a drought-tolerant evaluated as a domestic U.S. rubber , has undergone programs since the 1940s to elevate rubber content from 3-7% in wild plants to higher levels in improved lines, supporting production for medical applications. Russian dandelion () has also been selectively bred for root yield, with extractable rubber quantities optimized through field trials to rival synthetic alternatives during periods of shortages. These advancements demonstrate how targeted selection enhances industrial output while adapting plants to specific agro-climatic conditions.

Techniques and Methodologies

Traditional Selection Approaches

![Corn selection process showing phenotypic variation in maize ears][float-right] Traditional selective breeding approaches, predating the genomic era, primarily relied on phenotypic observation and manual selection of individuals exhibiting desirable traits, without knowledge of underlying genetic mechanisms. These methods, originating from early practices around 8000 BCE, involved humans identifying and propagating variants that enhanced utility, such as increased or docility. By the , systematic techniques emerged, exemplified by Robert Bakewell's and progeny testing in sheep breeding around 1760, which accelerated trait fixation through controlled mating. Mass selection, one of the simplest and earliest methods, entails harvesting seeds or selecting breeders from a large based on visible phenotypic superiority, such as plant height or size, then bulking progeny for the next generation. This approach is effective for traits with high and minimal environmental influence, as seen in improving crops where superior are chosen en masse post-pollination. In , mass selection ranks individuals by own-performance metrics like milk yield in , assuming genetic correlation with , though success depends on estimates often ranging from 0.2 to 0.5 for quantitative traits. Pedigree selection builds on mass selection by maintaining detailed records of ancestry to select from family lines with proven superiority, reducing and enabling targeted improvement in self-pollinated crops or . Developed prominently in the early , this method tracks parent-offspring performance, as in where lines are isolated and evaluated over generations for traits like stability. Pure-line selection, suited to homozygous self-pollinators, isolates and propagates individual plants to establish uniform varieties, a technique refined by in 1903 for eliminating segregation and stabilizing traits like seed size in peas. In practice, these approaches were applied across ; for instance, breeders selected for root color and shape over centuries, yielding diverse varieties from wild precursors by 16th-century . Limitations arose from polygenic trait complexity and environmental masking, often requiring multiple cycles—typically 5-10 generations—to achieve modest gains of 1-2% annually in . Despite inefficiencies compared to modern tools, traditional methods laid the foundation for , with empirical evidence from long-term experiments showing cumulative capture through repeated phenotypic .

Contemporary Genomic and Data-Driven Methods

Genomic selection (GS), a of contemporary methods, employs genome-wide molecular markers, typically single nucleotide polymorphisms (SNPs), to estimate breeding values through statistical models trained on reference populations with phenotypic and genotypic data. This approach, theoretically outlined by Meuwissen, Hayes, and Goddard in 2001, enables prediction of genetic merit in unphenotyped individuals, facilitating early selection and reducing generation intervals compared to phenotypic selection alone. Models such as genomic best linear unbiased prediction (GBLUP) or Bayesian methods capture polygenic effects, yielding prediction accuracies often ranging from 0.5 to 0.85 for . In contrast to (MAS), which relies on a set of markers linked to specific quantitative loci (QTL) for targeted traits, GS integrates markers across the entire to account for minor-effect loci, improving accuracy for low-heritability, polygenic phenotypes like or disease resistance. MAS remains useful for monogenic traits but underperforms for quantitative ones, whereas GS has demonstrated 2-4 times higher genetic gains in cycles shortened by juvenile selection. Implementation in accelerated post-2009, particularly in , where GS doubled annual genetic progress for production traits; for U.S. Holsteins, rates for milk yield and component traits increased by up to 192% since adoption, alongside fitness improvements like . In plants, GS optimizes doubled-haploid pipelines in , reducing cycle times, and enhances parental selection in , with historical data enabling accuracies up to 0.85 for grain yield. Data-driven enhancements leverage from high-throughput sequencing, , and environmental sensors, incorporating algorithms like for multi-trait genomic prediction and genotype-by-environment modeling. These methods boost accuracy by 3-5% through microbiome or multi-omics integration and support decentralized breeding via optimized training sets. Recent tools, including decision support platforms, further refine selections by simulating breeding scenarios, as seen in programs harnessing pangenomes for imputation accuracy.

Demonstrated Benefits

Productivity and Yield Enhancements

Selective breeding programs have demonstrably increased crop yields through targeted selection for higher grain output and improved harvest indices. In the United States , maize grain yields rose from 5.2 megagrams per hectare in 1970 to 11.1 megagrams per hectare in 2020, representing a 114% increase attributable in large part to genetic improvements via . Breeding efforts have also driven over a threefold increase in average yields for since the 1930s, with modern varieties outperforming historical ones by substantial margins under comparable conditions. Similar gains occurred in staple crops like and , where adoption of selectively bred cultivars, combined with fertilization, yielded dramatic productivity surges in regions such as and starting in the mid-20th century. In livestock, selective breeding has elevated production metrics for meat, milk, and eggs. Genetic selection has produced estimated 20-30% gains in carcass weight for beef, sheep, and pigs, alongside comparable improvements in dairy cow milk yields and laying hen egg output. These advancements stem from multi-generational selection prioritizing traits like growth rate and output efficiency, with programs focusing on both production and resilience to sustain industrial-scale farming. For dairy cattle, evaluations of genetic trends from 1970 to 2020 highlight breeding's role in countering environmental factors to boost overall herd productivity. Aquaculture species have seen accelerated growth and yield enhancements through selective breeding, often achieving 10-20% improvements per generation in key traits. In , breeding programs have delivered 10-17% increases in body weight per generation, enhancing fillet yield and overall biomass production. and programs similarly report rapid gains in growth rates and feed efficiency, enabling higher stocking densities and harvest volumes without proportional input increases. These genetic gains, realized through family-based selection and performance testing, have expanded commercial viability for species like , where breeding accounts for substantial portions of annual production upticks.

Adaptability and Resilience Improvements

Selective breeding has enhanced the adaptability of domesticated species to environmental stressors, including , , , and flooding, by prioritizing traits that enable sustained performance under suboptimal conditions. This process targets heritable physiological mechanisms, such as improved water-use efficiency, osmotic adjustment, and deeper root systems in plants, or thermoregulatory adaptations in animals. from breeding programs demonstrates that such selections yield lineages with quantifiable reductions in stress-induced losses, often measured through field trials comparing selected versus unselected populations. In crop species, selective breeding for has produced varieties that maintain yields during prolonged dry spells. hybrids developed through recurrent selection since the 1930s exhibit concurrent gains in grain yield and drought resistance, with recent genomic-informed programs projecting 17.8% lower yield penalties under severe drought by 2100 relative to unimproved lines. breeding for resistance, initiated after the epidemics, has deployed cultivars like those carrying the , which reduced regional yield losses from 20-50% in susceptible varieties to near zero in resistant ones during outbreaks. varieties selected for submergence tolerance, such as FR13A derivatives, survive up to 14-17 days of flooding—far exceeding non-selected types—through traits like quiescence and rapid post-stress recovery, as validated in multi-location trials across . Livestock breeding programs have similarly bolstered resilience to diseases and climatic extremes. In sheep, national schemes selecting against scrapie-susceptible PrP genotypes since the early 2000s have decreased prevalence by over 90% in targeted flocks, correlating with lower mortality and reduced needs. lines bred for resistance in subtropical regions show 20-50% fewer infestations and associated cases compared to susceptible breeds, achieved via phenotypic selection on infestation scores over multiple generations. breeding for resistance has incorporated genomic selection, yielding lines with 15-30% higher survival rates post-challenge in controlled studies, without compromising growth metrics. These outcomes underscore selective breeding's capacity to fortify populations against recurrent threats, though gains depend on genetic variance and ongoing .

Identified Risks and Criticisms

Biological and Genetic Drawbacks

Selective breeding often narrows by favoring specific traits, leading to where offspring from related parents exhibit reduced biological fitness, including lower , , and rates. A 2014 meta-analysis of quantified this effect, revealing an average trait decline of 0.137% per 1% increase in the inbreeding coefficient, with production-related traits suffering a steeper 0.351% reduction due to the expression of recessive deleterious alleles that would otherwise remain masked in outbred populations. This depression arises from decreased heterozygosity, which diminishes vigor and exposes homozygous harmful mutations accumulated over generations of artificial selection. In animals, these genetic constraints manifest as heightened prevalence of heritable disorders, particularly in closed breeding populations like dogs, where selection for aesthetic or functional extremes prioritizes over physiological robustness. Genome sequencing of dog breeds has identified elevated loads of deleterious variants, including loss-of-function mutations, that correlate with breed-specific bottlenecks and contribute to conditions such as , , and portosystemic shunts, with many breeds showing risks exceeding those in outbred dogs by factors of 2 to 10 for orthopedic and cardiac issues. Similarly, in , intense selection for traits like milk yield in has inadvertently amplified linked genetic defects, resulting in drops of up to 20-30% in high-producing lines and increased lameness incidence from skeletal imbalances, as selection pressures disrupt homeostatic gene networks without counterbalancing for overall viability. For plants, selective breeding erodes allelic diversity by fixating elite varieties, rendering crops more susceptible to and abiotic stresses through homogenized gene pools that lack the buffering polymorphisms found in wild progenitors. Empirical assessments of major staples like and demonstrate that domesticated lineages retain only 10-20% of ancestral , heightening vulnerability to pathogens, as evidenced by rapid disease sweeps in uniform fields where a single resistance locus failure can devastate yields, akin to the 1970 southern corn leaf blight that destroyed 15% of U.S. corn production due to cytoplasmic uniformity from breeding practices. This reduced evolvability constrains to novel environmental challenges, such as shifting climates or emerging pests, by limiting standing variation for natural or assisted selection responses. Beyond immediate fitness costs, selective breeding can entrench polygenic trade-offs, where gains in targeted traits impose correlated declines elsewhere via or , fostering long-term genomic instability. In and , for example, rapid selection for body mass has correlated with immune suppression and metabolic disorders, as quantitative genetic models show antagonistic effects where alleles boosting growth divert resources from reproductive or stress-response pathways, potentially accelerating or susceptibility in production environments. Such outcomes underscore the causal limits of unidirectional selection in finite genomes, where unchecked focus on few loci permits drift of unselected harmful variants, necessitating ongoing interventions like to mitigate accumulating .

Ethical and Societal Concerns

Selective breeding in livestock has been associated with unintended health consequences, such as increased incidence of lameness, mastitis, and reduced fertility in dairy cattle due to selection for high milk yield, leading to higher rates of culling and shortened lifespans. In companion animals, breeding for aesthetic traits like brachycephaly in dogs has resulted in chronic respiratory distress, higher rates of surgical interventions, and diminished quality of life, with studies documenting elevated morbidity from conditions such as brachycephalic obstructive airway syndrome. These outcomes stem from prioritizing production or appearance over physiological robustness, prompting calls from veterinary ethicists for breeding programs that incorporate welfare metrics, such as calving ease and longevity, to mitigate suffering. Intensive selection practices contribute to erosion of within breeds, heightening vulnerability to diseases and environmental stressors. For instance, analyses of breeds from 1980 to 2012 revealed an average loss of 70% of founder alleles, accelerating and fixation of deleterious mutations. In farm animals, focus on narrow traits like rapid growth in or high yield in has reduced intra-breed variation, exemplified by socioeconomic drivers diminishing traditional populations and fostering monocultures susceptible to pests, as seen in historical failures from uniform varieties. While some efforts preserve diversity through breed banks, critics contend that market-driven exacerbates these risks without adequate safeguards, potentially undermining long-term adaptability. Societal apprehensions extend to parallels with human applications, invoking the movement of the early , where selective breeding principles were coercively applied via forced sterilizations —affecting over 60,000 individuals deemed "unfit" under laws upheld by the in 1927—based on flawed assumptions of hereditary inferiority. This era's pseudoscientific racism, influencing policies in multiple countries until post-World War II repudiations, underscores risks of state or institutional overreach in directing reproduction, even as modern voluntary genetic selection via technologies like preimplantation diagnosis raises debates over equity and unintended . Proponents of ethical frameworks argue that while non-coercive selection could enhance , historical abuses necessitate stringent oversight to prevent or erosion of individual autonomy.

Comparative Analysis

Relative to Natural Selection

Selective breeding, also known as artificial selection, parallels in relying on heritable variation within populations and differential reproductive success to propagate advantageous traits over generations. drew this analogy explicitly in (1859), using examples of domesticated pigeons and dogs to illustrate how human-directed changes mirror undirected environmental pressures, demonstrating that substantial modifications could accumulate under either mechanism. Both processes require as raw material, sourced from and recombination, and favor traits enhancing propagation—survival and in , or to humans in . However, selective breeding diverges fundamentally in agency, intensity, and objectives. Humans impose selection criteria based on desired phenotypes, such as milk yield in cattle or docility in pets, unconstrained by wild survival demands, whereas natural selection filters traits strictly through fitness in native environments. This human mediation accelerates trait fixation: breeding programs can achieve near-100% selection intensity for target traits per generation by restricting reproduction to elite individuals, yielding changes in years or decades, compared to natural selection's typical millennial timescales for comparable shifts, as evidenced by the rapid divergence of dog breeds from wolves since domestication around 15,000–40,000 years ago. For instance, maize (Zea mays) evolved from teosinte via human selection over approximately 9,000 years, far outpacing natural adaptation rates in wild grasses. Selective breeding often entails greater risks to and long-term adaptability than . Intensive focus on narrow traits reduces allelic variation through bottlenecks and , increasing homozygosity and vulnerability to diseases or environmental shifts, as seen in pedigreed where effective population sizes drop below 100, amplifying recessive deleterious alleles. , by contrast, sustains polymorphism via balancing forces like or fluctuating environments, pruning only unfit variants while preserving adaptive potential; studies in wild populations, such as , show trait evolution without equivalent diversity erosion. Artificially selected lineages may exhibit reduced fitness outside human control—e.g., many chickens require assistance for due to exaggerated —highlighting a dependency absent in naturally evolved forms. Thus, while selective breeding amplifies short-term gains, it can compromise the robustness fosters through undirected, holistic pressures.

Relative to Genetic Engineering

Selective breeding, or artificial selection, differs fundamentally from in methodology, as it involves iteratively mating organisms with desirable traits to amplify existing genetic variations over multiple generations, whereas directly modifies DNA sequences using techniques such as or CRISPR-Cas9 to insert, delete, or edit specific genes, often achieving changes in a single generation. In terms of efficiency, enables faster trait development; for instance, the introduction of herbicide-tolerant traits in soybeans via Agrobacterium-mediated transformation occurred within years of research starting in the 1980s, contrasting with selective breeding's decades-long process to enhance similar resistances through cross-pollination and selection. is another advantage of , targeting individual genes with known functions, as opposed to selective breeding's reliance on polygenic traits that may inadvertently propagate linked undesirable alleles, such as reduced resistance in highly inbred lines. However, selective breeding operates within the organism's natural , avoiding the introduction of transgenes from unrelated species, which permits—exemplified by incorporating bacterial Cry genes for insect resistance, a trait unattainable through breeding alone. This expanded scope in facilitates novel adaptations, like papaya ringspot virus resistance developed in the 1990s via coat protein gene insertion, rescuing Hawaii's papaya industry where breeding failed due to insufficient natural variation. Regarding risks, both methods can reduce , but raises concerns over off-target mutations and , though empirical data from over 25 years of commercial crops show no verified risks beyond those of conventional counterparts, per regulatory assessments. Selective breeding, by contrast, has a millennia-long track record with observable drawbacks like the Cornish hen's skeletal deformities from rapid growth selection, yet lacks the ethical debates surrounding edits in . favors selective breeding, requiring minimal infrastructure compared to genetic engineering's need for specialized labs and bioinformatics, rendering it more feasible for small-scale or resource-limited applications.

References

  1. [1]
    Selective Breeding - an overview | ScienceDirect Topics
    Selective breeding is the process of selection to change organisms in a desired direction. For crop plants and livestock, objectives include, for example, ...
  2. [2]
    What is selective breeding? | Definition of artificial selection
    Selective breeding involves choosing parents with particular characteristics to breed together and produce offspring with more desirable characteristics.
  3. [3]
    Artificial selection - Understanding Evolution - UC Berkeley
    This process is called artificial selection because people (instead of nature) select which organisms get to reproduce. As shown below, farmers have cultivated ...<|separator|>
  4. [4]
    Sticky seeds and selective breeding: The cradle of civilisation
    Since 9000BC, long before the tipping point of next-generation sequencing, humans have been shuffling the genetic pack in order to grow heartier and ...<|separator|>
  5. [5]
    Artificial Selection - National Geographic Education
    Oct 19, 2023 · Artificial selection has long been used in agriculture to produce animals and crops with desirable traits.
  6. [6]
    Unintended consequences of selection for increased production on ...
    May 25, 2021 · Reduced fertility and lameness, claw health and mastitis results in unnecessary culling and reduced longevity. Selection pressure for growth ...
  7. [7]
    Genetic Improvement and Breeding Strategies in Livestock Production
    This can be achieved using a variety of methods, ranging from traditional selective breeding to advanced genomic selection and biotechnology. ... Peer Reviewed ...<|separator|>
  8. [8]
    Ethical Concerns about Fashionable Dog Breeding - PMC - NIH
    Plus, a selective breeding focus on physical traits only can lead to a decrease in the genetic variability of the species, an accumulation of genes associated ...
  9. [9]
    Current achievements and future prospects in the genetic breeding ...
    This review summarizes the recent achievements in conventional and modern molecular breeding methods and emerging omics technologies and discusses their ...Missing: peer | Show results with:peer
  10. [10]
    Selective Breeding - an overview | ScienceDirect Topics
    Selective breeding is defined as the process of selecting organisms to change their characteristics in a desired direction, with objectives often including ...
  11. [11]
    Estimating Trait Heritability | Learn Science at Scitable - Nature
    Heritability can also be estimated from the ratio of the observed selection response (R) to the observed selection differential (S) in artificial selection ...
  12. [12]
    A General Definition of the Heritable Variation That Determines the ...
    With artificial selection, the accuracy reflects the utilization of heritable variation by the breeder. (The intensity of selection merely reflects the overall ...
  13. [13]
    Understanding and using quantitative genetic variation - PMC
    Response to the first generation of selection can be predicted from the breeder's equation Response = h2 × selection differential. Selection changes gene ...
  14. [14]
    Using breeding and quantitative genetics to understand the C4 ...
    Quantitative genetics and selective breeding offer underexplored routes to identify regulators of these processes. We first review examples of natural ...
  15. [15]
    Taking quantitative genomics into the wild - PMC - NIH
    Dec 21, 2022 · The field of quantitative genetics aims to quantify the additive genetic component of this trait variance (i.e. the heritability), often with ...
  16. [16]
    Artificial Selection and Domestication: Modern Lessons from ...
    Jan 14, 2009 · In The Variation of Animals and Plants Under Domestication, Darwin (1868) considered two types of artificial selection in addition to natural ...
  17. [17]
    From wild animals to domestic pets, an evolutionary view of ...
    Accumulated archaeological, cultural and genetic evidence points to the Terminal Pleistocene (≈12,000 years ago) in the Fertile Crescent (Fig. 1) as the primary ...Missing: prehistoric | Show results with:prehistoric
  18. [18]
    The genetic prehistory of domesticated cattle from their origin to the ...
    May 28, 2015 · Cattle domestication started in the 9th millennium BC in Southwest Asia. Domesticated cattle were then introduced into Europe during the ...
  19. [19]
    1.6: Emergence of Domestication - Social Sci LibreTexts
    Aug 5, 2022 · Because domestication involves genetic alteration of plants by selective breeding, the morphology of seeds changes during the Neolithic. For ...
  20. [20]
    The genetic identity of the earliest human-made hybrid animals, the ...
    Jan 14, 2022 · Ancient DNA identifies elite equids in Bronze Age Mesopotamia as the first human-bred hybrid animals, the enigmatic kungas.Missing: practices | Show results with:practices
  21. [21]
    Ancient Egyptian Chariots and Horses: Power, Warfare, and Prestige
    Dec 10, 2024 · 1550–1070 BCE), Egypt established royal stables and refined breeding programs to produce horses suited to the Nile Valley's unique environment.
  22. [22]
    Ancient DNA Reveals the Earliest Evidence of Sheep Flocks During ...
    This study analyses ancient DNA extracted from nine skeletal remains from three archaeological sites in Southern Iberia, dated to the third millennium BC. The ...
  23. [23]
    Archaeological, genetic evidence expands views of domestication
    Apr 17, 2014 · One of the markers of domestication is a reduction in size, but archeological evidence indicates size decreases were slow and inconsistent.
  24. [24]
    Robert Bakewell | Department of Animal Science
    Bakewell was an agriculturist who revolutionized sheep and cattle breeding in England by methodical selection and inbreeding.
  25. [25]
    Robert Bakewell - Linda Hall Library
    Oct 1, 2021 · At a time long before there was any understanding of genetics, Bakewell learned how to select rams and ewes for their desirable traits, with the ...
  26. [26]
    Forum—ARS's Animal Breeding Work - AgResearch Magazine
    In the 18th century, a British sheep farmer named Robert Bakewell set out to improve his flocks by controlling their mating activities. At that time ...
  27. [27]
    [PDF] From Bakewell to BLUP - Katahdin Hair Sheep International
    Feb 10, 2023 · Many have heard of Robert Bakewell, a farmer known as the father of selective breeding. Bakewell (1725–1795) became famous for transforming his ...
  28. [28]
    Beginning of Selective Livestock Breeding | Research Starters
    Robert Bakewell, one of the most prominent of the agricultural breeders of the eighteenth century, revolutionized cattle and sheep breeding by using scientific ...Missing: Enlightenment | Show results with:Enlightenment
  29. [29]
    [PDF] Turning Herbage Into Money: The Economic Inducement and ...
    May 1, 2019 · A group of Central European sheep breeders centered in Brno advanced the selective breeding work of Bakewell in seeking to improve the wool ...
  30. [30]
    (PDF) HISTORY OF ANIMAL BREEDING - ResearchGate
    Jun 22, 2022 · Natural selection and efforts of animal breeders for years together have helped in formation of various breeds of good draft and milk qualities.
  31. [31]
    1780-1840 The industrial revolution and sheep breeding
    Robert Bakewell was the first person to introduce a selective breeding programme where sheep were selected for distinct characteristics to achieve improvement.<|separator|>
  32. [32]
    Agricultural Revolution: Remarkable Increase In ... - Cultivation Ag
    Dec 19, 2024 · It involved changes to farming methods, including crop rotation, selective breeding, and more productive use of arable land. These changes ...
  33. [33]
    Gregor Johann Mendel and the development of modern ... - NIH
    Jul 18, 2022 · This theory has also revolutionized breeding programs in agriculture; it would not have been possible to feed 8 billion people with the crop ...
  34. [34]
    Reinventing quantitative genetics for plant breeding - NIH
    Apr 15, 2020 · Classical quantitative genetics as founded by Fisher (1918) focused on breeding value. However, breeding value is of minimal value to plant ...
  35. [35]
    Evolution of Genetic Techniques: Past, Present, and Beyond - NIH
    In this paper, a brief summary of genetic history with short explanations of most popular genetic techniques is given.
  36. [36]
    Chapter 7: Marker Assisted Selection and Genomic Selection
    Marker-assisted selection (MAS) was applied as early as the 1980s when Tanksley and Rick (1980) used isozymes as markers for introgression of an exotic ...
  37. [37]
    Marker-assisted selection: an approach for precision plant breeding ...
    DNA markers have enormous potential to improve the efficiency and precision of conventional plant breeding via marker-assisted selection (MAS).
  38. [38]
    Prediction of Total Genetic Value Using Genome-Wide Dense ...
    It was concluded that selection on genetic values predicted from markers could substantially increase the rate of genetic gain in animals and plants.Methods · Results · Discussion
  39. [39]
    Genomic Selection in Dairy Cattle: The USDA Experience - PubMed
    Feb 8, 2017 · Official USDA genomic evaluations were first released in January 2009 for Holsteins and Jerseys, in August 2009 for Brown Swiss, in April 2013 ...
  40. [40]
    Changes in genetic selection differentials and generation intervals ...
    Jun 29, 2016 · The introduction of genomic selection in dairy cattle improvement programs in 2008 was expected to increase rates of genetic gain, ...
  41. [41]
    Past and Future Milestones of Plant Breeding - ScienceDirect
    Over the past 25 years, great advances on sequencing technology have ushered a new era of plant breeding. ... Together with increasing levels of industrial ...Plant Breeding: From... · Decoding Genomes Changed Our... · Plants Are Key To Everything...
  42. [42]
    Genomic selection: A paradigm shift in animal breeding
    Jan 1, 2016 · Three breakthroughs have resulted in the current widespread use of DNA information: 1) the GS methodology (Meuwissen et al., 2001), 2) the ...Abstract · Background · Genomic Selection Methods · Nonlinear Methods for...
  43. [43]
    Selective Breeding: Unraveling the Methods, Motivations, and ...
    Dec 6, 2023 · Selective breeding is identifying individuals with desired traits and breeding them to produce offspring with those traits, impacting their health and welfare.Missing: sources | Show results with:sources
  44. [44]
    A 100-Year Review: Methods and impact of genetic selection in ...
    A 100-Year Review: Methods and impact of genetic selection in dairy cattle—From daughter–dam comparisons to deep learning algorithms.<|control11|><|separator|>
  45. [45]
    Genetic's History : USDA ARS
    Oct 11, 2016 · As a result of several years of progeny testing and selective breeding, there was developed a band of uniform, smooth-bodied Rambouillets ...
  46. [46]
    Genetic Improvement and Sustainability of Animal Industries -
    Apr 25, 2022 · Genetic improvement through selective breeding from the 1960s to 2005 lead to 50% increase in litter size in pigs, 37% increase in lean pork ...
  47. [47]
    Producer Usage of Genetics | Cornell Applied Dairy Cattle Genetics
    Selective breeding has also lead to focus on increasing animal longevity and disease resistance in cattle, allowing cows to live longer and healthier lives.
  48. [48]
    U.S. beef cattle history: Entrepreneurship and genetic advancement
    Nov 13, 2020 · Selective breeding within breeds like Herefords was taking place, which allowed for a vast improvement in the final product. Cattle size became ...
  49. [49]
    Artificial Selection and the Origins of the Domestic Dog - BioLogos
    Apr 4, 2013 · One example of artificial selection that Darwin drew upon was the domestication of dogs – a process that has recently been greatly informed by genomics ...<|control11|><|separator|>
  50. [50]
    Dogs That Changed The World | Selective Breeding Problems | Nature
    Sep 16, 2010 · Selective Breeding Problems · Skin problems · Immune system disease · Blood disorders · Neurological, behavioral, and sensory · Hearing and vision.
  51. [51]
    From Wolves to Pugs and Great Danes – The History of Dog Breeds
    Selective breeding has occurred for thousands of years in numerous domesticated species, not just dogs. In our canine friends, breeding for specific behavioral ...
  52. [52]
    Deciphering the puzzles of dog domestication - PMC - NIH
    Dog breeds are classified into seven groups according to their guarding, herding, obedience, and hunting abilities: i.e., gundogs, working dogs, herding dogs, ...
  53. [53]
    Genomic Selection in Aquaculture: Application, Limitations and ...
    Industrial-scale selective breeding programs in aquaculture commenced in the 1960s with the development of Atlantic salmon breeding programs in Norway. Today, ...
  54. [54]
    Advances by Selective Breeding for Aquatic Species: A Review
    With a potential genetic gain of 12.5% per generation, aquaculture production could be doubled in 13 years if selective breeding was applied to all farmed ...
  55. [55]
    The importance of selective breeding in aquaculture to meet future ...
    Aquaculture generally trails far behind plant and farm animal industries in utilizing selective breeding as a tool to improve the biological efficiency of ...
  56. [56]
    [PDF] Selective Breeding - the NOAA Institutional Repository
    Supattra Uraiwan . A Review of Traditional Fish Selective Breeding Research and Practices in China with Emphasis on the Use of Genetic Markers.
  57. [57]
    Livestock 2.0 – genome editing for fitter, healthier, and more ...
    Nov 26, 2018 · For example, from the 1960s to 2005, selective breeding resulted in 50% larger litter sizes in pigs, an increase of lean pork meat of 37%, and a ...
  58. [58]
    Increased genetic gains in sheep, beef and dairy breeding programs ...
    Sep 14, 2015 · Large increases in genetic gain were found across species when female reproductive technologies combined with genomic selection were applied and inbreeding was ...
  59. [59]
    Impact on US Dairy - CDCB
    Genetic selection has contributed significantly to the improved productivity, efficiency, and well-being of dairy cattle worldwide.
  60. [60]
    The effects of breeding and selection on lactation in dairy cattle - PMC
    Jun 14, 2023 · Since 1960, the amount of milk produced per cow has almost tripled (Figure 1) which is due in part to genetics (reviewed by Strucken et al., ...
  61. [61]
    Sustainable livestock farming: Progress since 1950 - EW Nutrition
    Aug 16, 2024 · Increase in Milk Yield:: Milk yield per cow has increased about 4-5 times due to genetic selection, improved nutrition, technological ...
  62. [62]
    Artificial selection - Understanding Evolution - UC Berkeley
    Artificial selection is an evolutionary process in which humans consciously select for or against particular features in organisms.
  63. [63]
  64. [64]
    How important are genetics in dog behaviour? - AskAnimalweb
    Mar 26, 2025 · For thousands of years, humans have selectively bred dogs to perform specialised tasks, ranging from herding livestock and hunting to ...
  65. [65]
    The Genes That Shaped Pets and Domesticated Livestock
    Jun 16, 2025 · Comparative genomics revealed genetic differences between wild and domestic animals, highlighting traits influenced by human selection.
  66. [66]
    Advancing Genetic Selection and Behavioral Genomics of Working ...
    Sep 5, 2021 · The goal of selective breeding is to increase the average genetic merit of a population, thereby increasing the likelihood that, in the next ...
  67. [67]
    Breeding for 'Cuteness' Is Making Dogs and Cats Look More Alike
    May 12, 2025 · Pugs, Persian cats, and other smushed-face cats and dogs are more similar to one another than they are to the wild animals they evolved from.
  68. [68]
    AKC's Guide to Responsible Dog Breeding – American Kennel Club
    When selecting a breeding partner (most likely a sire for your dam), there is a simple principle to bear in mind: mate animals that complement one another.
  69. [69]
    Inbreeding depression causes reduced fecundity in Golden Retrievers
    We demonstrate a statistically significant negative correlation between fecundity and F ROH. This work sets the stage for larger scale analyses.
  70. [70]
    The effect of inbreeding, body size and morphology on health in dog ...
    Dec 2, 2021 · In this study, body size and inbreeding along with deleterious morphologies contributed to increases in necessary health care in dogs.
  71. [71]
    Responsible Breeding of Companion Animals
    Feb 1, 2024 · Breed registries and kennel clubs should describe breed standards that promote good health and welfare and disallow as breed standards physical ...
  72. [72]
    Review Genetic diversity, inbreeding and breeding practices in dogs
    Breeding practices, inbreeding and inherited disorders. Breeding and selection practices may have an impact on genetic structure of the breed. They also ...
  73. [73]
  74. [74]
    The Benefit of Using Selective Breeding for Aquatic Species.
    If FCR is 30% improved by selection after 11 generations compared with the wild base population this means that the Norwegian salmon production today saves 0.7 ...
  75. [75]
    [PDF] Genetic Improvement: Breeding for Better Aquaculture
    For example, some genetically improved strains of tilapia have recorded a 10-17% body weight increase per generation purely because of selective breeding and as.Missing: shrimp | Show results with:shrimp
  76. [76]
    genética spring's (gs) breeding program and its application to the ...
    Genética Spring continues and expands the pioneering shrimp breeding program initiated by CENIACUA in Colombia in 1997, a program designed and supervised by ...
  77. [77]
    AquaGen study finds selective breeding could double Norway ...
    Dec 1, 2022 · New research released by genomics company AquaGen has found Norwegian aquaculture production could be significantly increased through more-selective breeding ...Missing: quantitative | Show results with:quantitative
  78. [78]
    Genetics and Consequences of Crop Domestication
    It is clear that selection during domestication and plant breeding has reduced genetic variation in all crop species. Therefore, novel variation can be ...Genetics And Breeding · Domestication · A Case Study Of Maize: What...<|control11|><|separator|>
  79. [79]
    Evolution of Corn - Learn Genetics Utah
    Corn evolved from teosinte through selective breeding, starting with early changes in single genes, and later with many genes and small changes over time.
  80. [80]
    We've been genetically altering plants for thousands of years
    Nov 17, 2023 · The Dawn of Agriculture, considered to have begun about 10,000 years ago, gave rise to the artificial selection of plant species. Early humans ...Missing: practices | Show results with:practices
  81. [81]
    Cultivating success: Bridging the gaps in plant breeding training in ...
    Jun 5, 2024 · Approximately 50% of productivity improvement can be attributed to plant breeding, while the remaining 50% is due to better crop management ...
  82. [82]
    Plant genetic resources: What can they contribute toward increased ...
    The introgression of genes that reduced plant height and increased disease and viral resistance in wheat provided the foundation for the “Green Revolution”
  83. [83]
    Realized Genetic Gain in Rice: Achievements from Breeding Programs
    Dec 15, 2023 · Indeed, plant breeding has contributed significantly to increasing the productivity of major crops, including rice, over the last century.
  84. [84]
  85. [85]
    Science and History of GMOs and Other Food Modification Processes
    Mar 5, 2024 · Circa 8000 BCE: Humans use traditional modification methods like selective breeding and cross-breeding to breed plants and animals with more ...Missing: era | Show results with:era
  86. [86]
    Plant breeding and diversity: A troubled relationship? - PMC - NIH
    Breeding may contribute to diversity in farmers' fields or significantly reduce it. History has numerous examples of both. The diversity of many crops have ...
  87. [87]
    History of Agricultural Biotechnology: How Crop Development has ...
    Mar 5, 2012 · Over thousands of years farmers selected for desirable traits in crops, and thus improved the plants for agricultural purposes. Desirable traits ...
  88. [88]
    The next Green Revolution: integrating crop architectype and ...
    Average yields per hectare in developing countries increased by 208% for wheat, 109% for rice, and 157% for maize between 1960 to 2000, with Southeast Asia, ...
  89. [89]
    Breeding progress is a major contributor to improved regional maize ...
    Apr 21, 2025 · In the center of the US corn-belt, maize rainfed yields have more than tripled since 1950 while relying on the same amount of water inputs. Our ...
  90. [90]
    The Evolution of Cotton - Learn Genetics Utah
    Through selective breeding, they gradually developed a domesticated form that was even more useful. Domesticated cotton has more plentiful and longer fibers ...
  91. [91]
    The Genetic Landscape of Fiber Flax - PMC - PubMed Central
    Kryazh forms emerged under both natural and artificial selection carried out by Russian peasantry for centuries, aimed at the development of tall fiber flax ...Introduction · Results · Genetic Structure Of Flax...<|separator|>
  92. [92]
    Weaving the future: using genetics to improve sustainable fiber crops
    Jun 30, 2023 · Flax is one of the oldest plants cultivated by humans for fiber. The earliest known evidence of flax fiber use is in the Fertile Crescent ...
  93. [93]
    Current researches in ornamental plant breeding - PMC - NIH
    Breeders are asked to create new flower colors, attractive shapes, improved longevity, better fragrance, etc., and basic research on physiological and genetic ...Missing: peer | Show results with:peer
  94. [94]
    Ornamental Plant - an overview | ScienceDirect Topics
    The collection, domestication, cultivation, and breeding of ornamental plants became evident in Europe especially from the 17th–18th centuries onwards, ...
  95. [95]
    Domestication history and genetic changes for the newly evolved ...
    Lobularia maritima (sweet alyssum) is a popular ornamental plant that displays a range of flower colors, particularly white and purple.
  96. [96]
    The rubber tree genome reveals new insights into rubber production ...
    May 23, 2016 · Decades of selective breeding have resulted in a gradual improvement in rubber productivity, from 650 kg ha–1 derived from unselected seedlings ...
  97. [97]
    Guayule is an industrial crop that can be grown for its natural rubber ...
    Guayule is a natural rubber-producing industrial crop that is tolerant of marginal soils and drought, and it may be grown as an alternative crop with poor ...Guayule Is An Industrial... · 2. Materials And Methods · 3. Results
  98. [98]
    [PDF] Genetic Improvement of Guayule (Parthenium argentatum A. Gray)
    Abstract Among the more than 2000 plant species known to synthesize rubber, guayule, Hevea and Taraxacum kok-saghyz produce commercial grade rubber and latex. ...
  99. [99]
    Extractable latex yield from Taraxacum kok-saghyz roots is ...
    Dec 15, 2023 · Taraxacum kok-saghyz (TK) is a leading alternative rubber-producing plant that produces natural rubber (NR) latex in laticifers within its roots.
  100. [100]
    Traditional Breeding Techniques | Forage Information System
    The techniques used in creating a new cultivar are: mass selection, recurrent selection, top crossing, and synthetic variety development.
  101. [101]
    8.1.1: Mass selection (2024) - Textbook Animal breeding and Genetics
    Aug 2, 2024 · Mass selection is based on ranking the animals on their own performance. The success of mass selection is dependent on the heritability of the trait under ...
  102. [102]
    A comparison between pedigree breeding, mass selection and bulk ...
    The pedigree method proved superior to the bulk method in respect of selection for yield, straw strength and earliness. Parent-offspring correlations in the ...
  103. [103]
    Advances from Conventional to Modern Plant Breeding Methodologies
    It is possible because plant breeding has been successful to improve crop yields even without increasing cropping area or people involved in it. World ...
  104. [104]
    Breeding Methods in Crop Plants - TNAU Agritech Portal
    In mass selection, seeds are collected from (usually a few dozen to a few hundred) desirable appearing individuals in a population, and the next generation is ...
  105. [105]
    Genomic selection: Essence, applications, and prospects - ACSESS
    Jun 1, 2025 · Genomic selection (GS) is a breeding strategy to predict the genotypic merits of individuals for selection. GS helps to shorten breeding ...GENOMIC SELECTION IN... · BOX 1 Key summary... · APPLICATIONS OF GS IN...Missing: milestones | Show results with:milestones
  106. [106]
    [PDF] GENOMIC SELECTION: THE FUTURE OF MARKER ASSISTED ...
    The aim of this paper is to describe current MAS schemes, and combinations of velo- and whizzo genetics schemes with genomic selection. Comparisons of the ...
  107. [107]
    Changes in genetic trends in US dairy cattle since the ...
    Official genomic evaluations for dairy cattle in the United States were released in 2009 for Holstein (HO), Jersey (JE), and Brown Swiss (BS), 2013 for Ayrshire ...
  108. [108]
    Genomic Impact - CDCB
    Genomic selection in U.S. Holsteins has doubled the annual rates of genetic gain for production traits. For fitness traits like fertility, udder health, and ...
  109. [109]
    Advances in genomic tools for plant breeding: harnessing DNA ...
    Nov 7, 2024 · Rutkoski et al. [136] reported that genomic selection (GS) improved wheat grain yield by 15% compared to conventional breeding methods.
  110. [110]
    Expanding genomic prediction in plant breeding - Cell Press
    Jan 30, 2025 · Genomic prediction (GP) uses statistical machine learning and big data to improve plant breeding, with deep learning models and software ...
  111. [111]
    Microbiome-enabled genomic selection improves prediction ...
    Compared to the conventional GS model utilizing only SNPs, the addition of ASVs resulted in accuracy improvements of 4.1%, 3.6%, and 3.4% at 11, 21, and 35 DAMS ...
  112. [112]
    Harvest index has increased over the last 50 years of maize breeding
    Sep 1, 2023 · In the US Corn Belt, maize grain yields increased from 5.2 Mg ha-1 in 1970 to 11.1 Mg ha-1 in 2020 (114% increase; Table 5; USDA-NASS, 2022b).
  113. [113]
    Plant Breeding: A Success Story to be Continued Thanks to ... - NIH
    The adoption of the new cultivars combined with higher levels of fertilization resulted in dramatic yield increases in Southeast Asia (rice) and Mexico (wheat).
  114. [114]
    Enhancing animal phenotyping for improved productivity and ...
    ... livestock sector can be ensured. This can be achieved through selection and improvement of both production traits (e.g. meat, milk and egg yield) and ...
  115. [115]
    Effects of genetic and environmental trends from 1970 to 2020 on ...
    The objectives of this study were to evaluate associations of genetic change, cow management and nutrition, inbreeding, and crop yields from 1970 to 2020
  116. [116]
    What can selective breeding do for your species?
    Feb 1, 2003 · Past experience with salmon and tilapia suggest improvement rates of 10 to 20 percent per generation are possible. Accordingly, we can make ...<|control11|><|separator|>
  117. [117]
    Breeding crops for drought-affected environments and improved ...
    We review methodologies and strategies that have been used to successfully breed crops with improved levels of drought resistance.
  118. [118]
  119. [119]
    Editorial: Crop Breeding for Drought Resistance - Frontiers
    These articles reported studies on eight crops, including rice, maize, barley, durum wheat, winter wheat, chickpea, cotton, and sweet pepper.
  120. [120]
    Review: Livestock disease resilience: from individual to herd level
    Successful examples include the national sheep breeding programmes for scrapie resistance in several European countries, or marker-assisted selection for ...
  121. [121]
    Can breeders prevent pathogen adaptation when selecting for ...
    Nov 8, 2022 · Recent research shows that genetic selection has high potential to reduce the prevalence of infectious diseases in livestock.
  122. [122]
    Molecular breeding of livestock for disease resistance - ScienceDirect
    Various approaches have been explored to enhance disease resistance in livestock, including selective breeding and crossbreeding, expressing genes that disrupt ...
  123. [123]
    Inbreeding depression in livestock species: review and meta-analysis
    Jun 28, 2014 · Inbreeding depression averages a 0.137% trait decrease per 1% inbreeding, with a larger 0.351% decrease for production traits.
  124. [124]
    The genetic consequences of dog breed formation—Accumulation ...
    As a consequence of selective breeding, specific disease-causing mutations have become more frequent in certain dog breeds. Whether the breeding practice also ...
  125. [125]
    Ten inherited disorders in purebred dogs by functional breed ...
    Jul 11, 2015 · For aortic stenosis, GDV, early onset cataracts, dilated cardiomyopathy, elbow dysplasia, epilepsy, and portosystemic shunt, most purebred ...
  126. [126]
    Crop genetic erosion: understanding and responding to loss of crop ...
    Sep 13, 2021 · Loss of this diversity, termed crop genetic erosion, is therefore concerning. While alarms regarding evident declines in crop diversity have ...Introduction: evolving... · III. Evidence for, and drivers of... · Conclusion: mitigating...
  127. [127]
    Low genetic variation - Understanding Evolution - UC Berkeley
    Without genetic variation, a population cannot evolve in response to changing environmental variables and, as a result, may face an increased risk of extinction ...
  128. [128]
    Undesirable side effects of selection for high production efficiency in ...
    Genetic selection may lead to loss of the homeostatic balance of animals, resulting in the occurrence of pathologies and consequently in impaired animal welfare ...
  129. [129]
    Ethics in animal breeding - PubMed
    Ethical breeding uses healthy animals, considers species concerns, and prioritizes animal welfare. Overbreeding raises welfare issues, and production focus is ...
  130. [130]
    Pedigree data indicate rapid inbreeding and loss of genetic diversity ...
    Sep 12, 2018 · We also found indications of extensive loss of intra-breed variation; on average 70 percent of founder alleles are lost during 1980–2012.Missing: societal | Show results with:societal
  131. [131]
    ANALYSIS Socioeconomic causes of loss of animal genetic diversity
    This article focuses on the socioeconomic factors and processes that have contributed to the loss of genetic diversity of domesticated animals, particularly ...
  132. [132]
    Exploring animal breeding through the lenses of authoritarian and ...
    Oct 11, 2023 · In this paper, I discuss the ethics of domestic animal breeding and new ways to achieve it. In doing so, I focus primarily on the concept of eugenics.Introduction · The concept of eugenics and... · Authoritarian eugenics and...
  133. [133]
    Eugenics and Scientific Racism
    May 18, 2022 · The Big Picture: Eugenics is the scientifically inaccurate theory that humans can be improved through selective breeding of populations.
  134. [134]
    Unfit to Breed: America's Dark Tale of Eugenics
    Eugenics is broadly defined as the use of selective breeding to improve the human race. The main principle behind the early eugenics movement was the assumption ...
  135. [135]
    What is immoral about eugenics? - PMC - NIH
    It is a “given” in discussions of genetic engineering that no sensible person can be in favour of eugenics. The main reason for this presumption is that so ...
  136. [136]
    Where science meets fiction: the dark history of eugenics | Genetics
    Jun 20, 2022 · The development of the Nazis' eugenics programmes was supported intellectually and financially by the American eugenicists, erroneously obsessed ...
  137. [137]
    Artificial vs. Natural Selection | National Center for Science Education
    Oct 2, 2008 · The only difference between natural selection and artificial selection is whether the difference in reproductive success is driven by naturally occurring ...
  138. [138]
    Darwin and His Pigeons. The Analogy Between Artificial and Natural ...
    Oct 29, 2011 · The analogy between artificial selection of domestic varieties and natural selection in nature was a vital element of Darwin's argument in his Origin of ...
  139. [139]
    why does selective breeding speed up the evolutionary process so ...
    Nov 20, 2022 · Because selective breeding can very strongly select for traits without consideration for survival fitness.Missing: herding | Show results with:herding
  140. [140]
    Natural vs. Artificial Selection: 17 Key Differences, Examples
    Jan 3, 2025 · Natural selection is a process of adaptation by an organism to the changing environment by bringing selective changes to its genotype or genetic composition.
  141. [141]
    Strategies of preserving genetic diversity while maximizing ... - NIH
    GS led to higher genetic gain per unit of time and higher genetic diversity loss than phenotypic selection by shortening the breeding cycle time. The ...
  142. [142]
    14.3: Selective Breeding and Genetic Engineering - Biology LibreTexts
    Jul 29, 2024 · These practices rely upon selective breeding (artificial selection), human-facilitated reproduction of individuals with desirable traits.
  143. [143]
    How does GM differ from conventional plant breeding? - Royal Society
    The goal of both GM and conventional plant breeding is to produce crops with improved characteristics by changing their genetic makeup.Missing: industrial | Show results with:industrial<|control11|><|separator|>
  144. [144]
    Unintended Effects from Breeding - Safety of Genetically Engineered ...
    This chapter explores the likelihood of unintended effects from diverse methods of genetic modification of plants and animals.PLANT BREEDING · ANIMAL BREEDING · MECHANISMS BY WHICH...
  145. [145]
    Genetic modification techniques in plant breeding: A comparative ...
    This technique creates genetic variations that can lead to beneficial traits in crops. Mutational breeding has been successfully used to develop new crop ...